LOCUS       NM_001109058            1425 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus similar to human chromosome 22 open reading frame
            39 (C11h22orf39), mRNA.
ACCESSION   NM_001109058 XM_001061569 XM_573333
VERSION     NM_001109058.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1425)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473999.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001061569.1, XM_573333.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ216047.1, CB699847.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760433,
                                           SAMEA5760476 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q23"
     gene            1..1425
                     /gene="C11h22orf39"
                     /note="similar to human chromosome 22 open reading frame
                     39"
                     /db_xref="GeneID:498122"
                     /db_xref="RGD:1595717"
     exon            1..50
                     /gene="C11h22orf39"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..344
                     /gene="C11h22orf39"
                     /codon_start=1
                     /product="UPF0545 protein C22orf39 homolog"
                     /protein_id="NP_001102528.1"
                     /db_xref="GeneID:498122"
                     /db_xref="RGD:1595717"
                     /translation="MAVAGSWQPPRPCEVYRAEWELCRSAGHVLYHYYVHGERPDCRQ
                     WLRDLTSCREWEESRSAEAQRSLCESEQTRVQAAQKHTLIWALRKRPPADWNLPLPQD
                     KDQ"
     exon            51..218
                     /gene="C11h22orf39"
                     /inference="alignment:Splign:2.1.0"
     exon            219..1425
                     /gene="C11h22orf39"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaatctctgt cacacaggac ctggacatgg cggtcgcagg cagctggcaa cctccccggc
       61 cgtgcgaggt ctaccgcgcc gagtgggagc tttgccgcag cgccgggcac gtcctatacc
      121 actactatgt ccatggcgag cggccggatt gcaggcagtg gctgcgcgac ctgaccagct
      181 gccgtgagtg ggaggagagc cgcagcgccg aggctcagcg atccctctgt gagagcgagc
      241 agactcgggt ccaggccgct cagaagcaca ccctcatttg ggccttgagg aagaggcccc
      301 ctgcagactg gaacctccct ctaccacagg acaaggacca gtgacgaaca cccgcaaccc
      361 tgcccttgac ctagacttcc gctggctctt acttgacgtg gaccacacag caaggcgttt
      421 ccagctgtaa ctgcctactg cccactgggt ctgggcatct cttcactttg atactctgaa
      481 agacacccgc atccacatgc aggaagccaa gcgccgaggc aggtgtctga gccgtaaggt
      541 gggtccatcc tgtccacctc tcctgcagac atccatacca gaggcggcgg tcctgaggtg
      601 tgaaaaatct caagtacaca atggcagccc tgacctgtgt ggatccaggg cacagaagtc
      661 agaataaggt tgctagacag tcctgctgtg atcggccctc cttgaccgag agatggactg
      721 cagtgtctta tttggtgact gttgtgtttc ctagtacgga cagagctcac acttgcttcc
      781 ctggagacac agtagagcat gctttgtggg cgggcgacct gcccccctgc accagcatct
      841 cttgctggtt ttgcagactt tgaaatgaat acacacagca ctgcaggaac caaggagtct
      901 ggagtcaaga aatccaagtc ccgggttggg gatttagctc cgtggtaaag cgcttgccta
      961 gcaagcgcaa ggccctgggt tcggtcccca gctccggggg gaaaaaaaaa aagaaatcca
     1021 agtcccaagg cagagcgaga cagagttcag gtccgaagaa tatgggattt aggcctcttg
     1081 atttctcctc attgttaatg tatttttaaa aagctgtttc atgtgtttga ttccaaaagc
     1141 aacctgaaaa ttatatcaca ctttatacct gtcctaatta gggtttctat tgctgcgatg
     1201 aaacaccatg gccaaaagca agctggggag gagagggctt attcagctta tgtgtgtttc
     1261 cacattgtat tccaaaatca ggatagaaac tcaaacaggg cagaaaccag aggcaggagg
     1321 tgatgcagaa gccatggagg ggtgctgttt actggcttgc tcctcatggg ttgctcagcc
     1381 tgctttctta gagaactcag gaccaaaagc ccagtgatag cacca
//
