LOCUS       XM_039082769            1113 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Poly(rC)-binding protein 2
            (Alpha-CP2) (Putative heterogeneous nuclear ribonucleoprotein X)
            (hnRNP X) (CTBP) (CBP) (LOC367191), mRNA.
ACCESSION   XM_039082769
VERSION     XM_039082769.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082769.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1113
                     /gene="LOC367191"
                     /note="similar to Poly(rC)-binding protein 2 (Alpha-CP2)
                     (Putative heterogeneous nuclear ribonucleoprotein X)
                     (hnRNP X) (CTBP) (CBP); Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 ESTs, 38 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:367191"
                     /db_xref="RGD:1591989"
     CDS             497..1084
                     /gene="LOC367191"
                     /codon_start=1
                     /product="poly(rC)-binding protein 2-like"
                     /protein_id="XP_038938697.1"
                     /db_xref="GeneID:367191"
                     /db_xref="RGD:1591989"
                     /translation="MLPNSTERAITIAGIPQSIIECVKQICVVMLESPLKGVTIPYRP
                     KPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSP
                     EVKGYWAGLDASAQTTSHELTIPNGLIGCIIGRQGAKINEIRQRSGAQIKTPNPVEGS
                     TDRQVTITGSAASISLAQYLINVRLSSETGGMGSS"
ORIGIN      
        1 cgccgctccc cttttcccct cagtgactcg tgcctccagt gaccaaagac ttgaccactc
       61 aaagtccagc tccctgtaac tgctcgacat ggacaccggt gtgactgaag gtggattaaa
      121 tgtcactctc accatcaggc tacttatgca cggaaaggaa gttggcagta tcatcggaaa
      181 gaaaggagaa tctgttaaga agatgcggga ggagagtggt gcacgtatca acatctcaga
      241 agggaattgt cctaagagaa ttatcacttt ggctggaccg actaatgcca tcttcaaagc
      301 cttcgctatg atcattgaca aactggaaga ggacataagc agctctatga ccaatagcac
      361 agctgcccgt agacccccgg ttacctcacg gctggtggtt cctgctagtt agtgtggctc
      421 tcttattgga aaaggtggtt gcaagatcaa ggaaataaga gagagtacag gggctcaggt
      481 ccaggtggca ggggatatgc tccccaactc tactgagcga gcaatcacta ttgctggcat
      541 tccgcaatcc atcattgagt gtgtcaaaca gatctgcgtg gtcatgttgg agtcccccct
      601 gaagggcgtg accatcccgt accggcccaa gccctccagt tctccagtca tctttgcagg
      661 tggtcaggcc tataccattc aaggacagta tgccattcca cagccagatt tgaccaagct
      721 gcaccagttg gcaatgcaac agtctcattt tcccatgacc catggcaaca ccggattcag
      781 tggcattgaa tccagctctc cagaggtgaa aggctattgg gcaggtttgg atgcatctgc
      841 tcaaactact tctcatgaac tcaccattcc aaacggtttg attggctgca taattgggcg
      901 tcagggagcc aaaatcaatg agatccgtca gaggtctggg gcgcagatca aaactccaaa
      961 cccagtggaa ggatctactg atcggcaggt taccatcact ggatctgctg ccagcattag
     1021 tctggctcag tatctaatca atgtcaggct ttcctcggag acaggtggca tggggagcag
     1081 ctagaacaga gcagattcat ccataatccc ttt
//
