LOCUS       XM_039103658            2892 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to T-cell activation Rho
            GTPase-activating protein (LOC365791), transcript variant X1, mRNA.
ACCESSION   XM_039103658
VERSION     XM_039103658.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103658.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2892
                     /gene="LOC365791"
                     /note="similar to T-cell activation Rho GTPase-activating
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:365791"
                     /db_xref="RGD:1359174"
     CDS             206..2749
                     /gene="LOC365791"
                     /codon_start=1
                     /product="rho GTPase-activating protein 20 isoform X1"
                     /protein_id="XP_038959586.1"
                     /db_xref="GeneID:365791"
                     /db_xref="RGD:1359174"
                     /translation="MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKK
                     FKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSEEQKVQWYTFL
                     TRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIE
                     DYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPLLPGLFMENQS
                     WDTGGQFILKPRDSAGSQQQDAKKRRRKSCMTSCFHGGCVPHHDQECIRDDKRGKLFG
                     QDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDI
                     YQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKP
                     NADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISL
                     VTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPG
                     ERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNC
                     SPNILKDVNVPAVILVCGSLTIQDYPYPTQDMLSVIAEKGQCSDDIFRMQSEKSHWSL
                     KEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIA
                     SIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLF
                     GRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIET
                     IDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD"
ORIGIN      
        1 ttcaccttga caacaccggg tctcagactt cagtggtttt cctgctaact gcagtcacca
       61 gtttggtgtt caagagtagg aaggcgaaat aaaatttcaa gtctattcaa aggttctccc
      121 ttccaggctc cactgaaaag ttggagacct gtatcaggag tactgttagt ttttattcta
      181 tgtggaaacc cttgtgaagg aagacatggg ggaaatacat cgaaccttgc tctgtcaagg
      241 ccctgtggaa ctcacaagtg gcaggaaaag gaataaaaga tatctctcct tatttgatga
      301 tgttttggtt gtgtctacta acctgactaa gaaaaagttt aagataaaat gtatcatccc
      361 actgaattat ctgtgggtgg tggatgatgt ggaacttgtc agggcaaatc aaacctgtac
      421 ttgcaagacc atcttcttct actgggccac tgggaatgct ttggccacct ttcgttcaga
      481 agaacagaaa gtgcaatggt atactttcct caccagatcc atcagtgaag ccaagaaggg
      541 gatcaagaaa actttcccac tgcacatatt ccctgaggat atccaaacct gtgacagttc
      601 tttatgtgta acagcaacaa acatggatac tgtgaatgat ataatggaga agttactacc
      661 aatgataaga gtgcataaca ttgaagatta ccaactttgg ttcagtcctg gccacaagga
      721 agctccaaga gcactccaag gccacgagta tccatatgac attataatga acaacgttca
      781 aaataacctc agtaaatcga actcaaaaat tttcacggct ttccccctct tgcctgggct
      841 gtttatggaa aaccaaagct gggatacagg agggcagttc atattaaagc ccagagactc
      901 agctggaagc cagcagcaag atgcaaagaa aagacgtaga aaatcttgca tgacatcatg
      961 tttccatggg ggctgtgtgc cccaccatga ccaagaatgc ataagagatg ataagagagg
     1021 aaaacttttt gggcaagatt tgagctccat ttgtcaggat ggcaaactgc ccaccattat
     1081 tctggacatg ctgtccagaa taaaagataa aggacctaca acagacgata tatttttaat
     1141 aactcccaat ggatcattat gcaaaactat aaaggagaaa ttggacaatg gggaaaatgt
     1201 ggatatatat cagcaaccag tgcatgtggt agcctggatc ttaaaggagt ttcttcaatc
     1261 tatcaaagga agtttactga cttccaaatt atacgaccag tggcttattg tacccgagaa
     1321 ggtgaatgac aaagagaaat tagcagcagt gaagagtctt ctagaaaaac ttccaaaacc
     1381 taatgctgat cttctcagac aactgtttag aatactacat caaataaaaa caaattcttc
     1441 tgtcaataat atgtcatcat tccgtctgtc tcttgagaca gccccatgta ttttatggct
     1501 tcctagctac agaaataaca tattgacaaa tgatatcgcc aaaaagattt ctctggtaac
     1561 atttatgatc gacaattctc cagaactgtt tggagaggac attgtggcag tatggtatga
     1621 aacatcacta taccatcctc ccggactgaa gtacccatgt tcccagaata ctccatctag
     1681 caatgggatc atggaggaaa cggaacatgg actcagcagc tgccccggtg agaggacatg
     1741 cacccctgat tttgatgaac tgccgagaag tggtgcagct gcttcaattc catatgaggg
     1801 cattctagcc tcagagaaag gtgaaggaaa tgagtccaca acccaaccag aacctgttca
     1861 aaattcacca acaccacaaa ccaaaaaaga attggggaat tgttccccca atattctcaa
     1921 agatgttaat gtgcctgctg tgatacttgt gtgtggatcc ctaacaatac aagattatcc
     1981 ttatcctaca caggatatgt tgtccgtaat tgcggaaaaa ggacaatgtt ctgatgacat
     2041 attcagaatg caatcagaaa aatcacactg gtcccttaag gaaaaggtta acaccggaaa
     2101 acatgttaac ttgaaagaag aatccgtgct cactgtcgct tctgtcgtaa aggactttat
     2161 caaaaatatc gaaggaagtt tactttcctg tgatttatat gaaaattggc ttagcatccc
     2221 agatgaagga ccactccttg gaaaaattgc atccatccaa aatatccttt tgaagatgcc
     2281 aaagccaaac tacgttttgc ttaagcaact catctgtgtt ctacaaaaaa ttaaagctgc
     2341 ttctacgaac caattagaca cctttgactt gtctgttcgc atagcacctc atgttttatg
     2401 gaatccgact tgtaagacct tatttgggag ggatctctca aagaagttgt ccattataaa
     2461 attcatgatt gacaactgtc aagaattatt tggagaaaat gataatatat tttgtgaaga
     2521 taatcagaag tcttatgaca tcaacctatc ttctgataca ttaaatactt ctggcaaagc
     2581 aactcttatg attgaaacca tagatgacca cgatgtgaag acctcaaagt ctaatactaa
     2641 aaaattagag atgtcgtctg ctgttcctca tgagggaggt cctacagcag gccacaacgg
     2701 aacaacttca aaatataatg ttccacaaga gaaaattctt catgactgaa gaagtttccg
     2761 gtcattgtat ttcaatgttc tcttctacct cccacaaacc atagcggaag agattattac
     2821 aagaaacaac ttcagtttta tatttaacca tattgtttgc tataattgtt ttactcacta
     2881 tatgtacttt at
//
