LOCUS       XM_056985151            1401 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus SET nuclear oncogene-like (LOC313310),
            mRNA.
ACCESSION   XM_056985151
VERSION     XM_056985151.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_056985151.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1401
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1401
                     /gene="LOC313310"
                     /note="SET nuclear oncogene-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins, and 93% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:313310"
     CDS             56..814
                     /gene="LOC313310"
                     /codon_start=1
                     /product="protein SET"
                     /protein_id="XP_056841131.1"
                     /db_xref="GeneID:313310"
                     /translation="MAPKRQSAILPQPKKPRPFAAPKLEDKSASPGLPKGEKEQQEAI
                     EHIDEVQNEIDRLNEQASEEILKVGQKYNKLHQPFFQKRSELIAKIPNFRVTTFVNYP
                     QVSELLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNES
                     GDPSSKSTEVKWKSGKDLTKRSSQTQNKASRKRQREETESFFTWFTDQSDAGADELRE
                     AIKDGIWPNPLQYYLVPDMDDEGGEAEDDDEDDE"
ORIGIN      
        1 cctactgtga acatcagtgc tctggcctcc gtctcctggc cacctccctc gctccatggc
       61 cccgaagcgg caatctgcga tcctgcctca gcccaagaaa cccagaccct ttgctgcccc
      121 gaagctggag gacaagtcgg cctctcccgg cctcccgaag ggcgaaaaag aacagcaaga
      181 agcaattgaa catattgatg aagtacaaaa tgaaatagac agacttaatg aacaagccag
      241 tgaggaaatt ttgaaagtag gacaaaaata taacaaactc caccaaccat tttttcagaa
      301 gaggtcagaa ctgatcgcca aaatcccaaa ttttcgggta acaacatttg tcaactatcc
      361 acaagtgtct gaactccttg gggaagaaga tgaggaggcc ctgcattatt tgaccagagt
      421 tgaagtaaca gaatttgaag acattaaatc aggttacaga atagattttt attttgatga
      481 aaatccttac tttgaaaata aagttctctc caaagaattt catctgaatg agagcggtga
      541 cccatcttca aagtccaccg aagtcaaatg gaaatctgga aaggatttga caaaacgctc
      601 aagtcaaacg cagaataagg ccagcaggaa gaggcagcgt gaagagacag agagcttctt
      661 tacctggttt actgaccaat ctgacgcagg tgctgacgag ttacgagagg ccatcaaaga
      721 tggtatttgg ccaaatcctt tgcagtacta tttggttcct gatatggacg atgaaggagg
      781 agaggcagag gatgacgatg aagacgacga ataggaggaa gggttggaag atatcgatga
      841 agaaggagac gaggacgaag gtgaagaaga tgatgatgag gatgaagggg aggaaggaga
      901 ggaggacgaa ggcgaggatg actagcacag aagaccaatg gatccaacct tctttttcat
      961 tttcttttta ttttttaaat ttccccagtt cctgagagtg agttgcagtc ctttcctccc
     1021 tgtccctctg tgctcagctg ccctgttttt gaggtctcaa catcatggtt ctcaactaat
     1081 ttgggggaaa atatcttgag caaaatacaa caggaaaaga atcttcacgt ttctgttcta
     1141 aattcatttt tatccttgtc tcaaactgtg gattcaacac caccaccatg ctctgtggga
     1201 agaaagaaaa gccctccagt tggctctgct ggaggctgga gggtgctagg cccctgtgta
     1261 gtagtgcata gaattctagc tttttctttt ctctgtatat tgggctcaga gattacactg
     1321 tgtctctatg tgaatacaga cagttagcat ttaccaacat ggatctgtct actttctctt
     1381 gtttaataaa aaggaaaaaa a
//
