LOCUS       NM_001013930            1905 bp    mRNA    linear   ROD 07-OCT-2023
DEFINITION  Rattus norvegicus RIKEN cDNA 2310002L09 like (2310002L09Rikl),
            mRNA.
ACCESSION   NM_001013930 XM_216430
VERSION     NM_001013930.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083698.1.
            
            On Apr 20, 2005 this sequence version replaced XM_216430.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083698.1, CK600268.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760384, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q31"
     gene            1..1905
                     /gene="2310002L09Rikl"
                     /note="RIKEN cDNA 2310002L09 like"
                     /db_xref="GeneID:298139"
                     /db_xref="RGD:1359584"
     exon            1..231
                     /gene="2310002L09Rikl"
                     /inference="alignment:Splign:2.1.0"
     CDS             105..758
                     /gene="2310002L09Rikl"
                     /codon_start=1
                     /product="FERM domain-containing protein 3"
                     /protein_id="NP_001013952.1"
                     /db_xref="GeneID:298139"
                     /db_xref="RGD:1359584"
                     /translation="MAKCLVKIRTQRSLQLQMINHCTSNVFVRLLKHGSKVIPRNAGA
                     PLSEVDASGCMVARSPVKRSRSADSPSKEEDKVKEDPLTISELAYNPSASLLSPQVDD
                     DEVDILFDCPSRFVLEREDTDLFEELEADENTFLMTEEEKVKEARQALSWSYSILTGR
                     IWLNPLVKRFSRFLVVGLGLLLFVFPLLLLLLESGIDISILFKRMNLSSFPLNTTVP"
     exon            232..1882
                     /gene="2310002L09Rikl"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaacagaatg gacagtgagc agaaggtcaa agctgttgtt gctggttgca tatgtacagg
       61 gccactactg acaagagacc cttaggaaga tcacatcatt aaatatggca aaatgcttgg
      121 tcaagatcag gactcaacga agcctccaat tgcagatgat aaaccactgc accagtaatg
      181 tgtttgtccg tctgctgaaa catggctcca aggtcatacc tcgaaatgct ggtgccccat
      241 tgtctgaagt ggatgcttct gggtgcatgg ttgcaagatc accagtgaag agatctcgga
      301 gtgcagattc tccaagtaaa gaggaagaca aagtaaaaga agaccccttg accatttctg
      361 aactagcata caatcccagc gccagcctgc tctctcccca agtggatgat gatgaagtag
      421 acatactatt tgactgtcca tctaggtttg tgctagaaag agaagacacg gatttatttg
      481 aggaattaga agcagatgaa aatacctttt tgatgactga agaggagaag gtgaaggaag
      541 ctcgccaagc tttgtcatgg agctattcca tcctgaccgg ccgtatctgg ctcaatcctc
      601 tggtcaagcg tttttctagg ttccttgtgg tgggcctggg actgcttctg tttgtatttc
      661 ccctacttct cctccttttg gagtcaggta ttgatatctc catcttattc aaaagaatga
      721 atttgagtag ttttcctttg aatacaactg tcccctaaag gaggactttt tttttctaca
      781 tgttgggctt ccctgataag agaaagggtt gtatacaata ttaaaattat ctttttcagc
      841 agatgccatg ttctaagggg tcctgggtca taaagctgaa tgccaaactc ttaagttgac
      901 tttctatgct ttgatatact taataccagt ttaaaacaaa taagattgtt agttatatat
      961 tagaaaagca tcctttaagt aatcaaaggc atgttatctt tatttcagtg tagacatgct
     1021 ctttatctta cctcaaagtg acttattttt cctgcttctt tatcaatgta atcactatga
     1081 aagggaatgt taataattag aattttagtc agagttcaag ggaatacttt tcagtataat
     1141 tcttagtaaa aaaaaagcat tctctaagaa atatttatac aactaaattt atgctgggtt
     1201 tttctttcag tttttaaaga gtatttttat attaaaagaa ttttgataaa cttttctttt
     1261 tgcaaaatgt cccactaaat tttgtaagta tacatatttt aaaactagta tacagaaatg
     1321 tatcagaaat tatttttaca ttatggcacc agtttttata aagtatatgt ttggctgaaa
     1381 aacccaacac tttataacta tctgcaaatg atatagaaaa cctagtggaa agaagttgta
     1441 gtaaattgtc caaacagatg ctggaactga tggtatagat ggagaatatt gagttggcat
     1501 gtgaggtaca tcattcatca tttacgcatg attaactagt acttttattt ttgttatgtg
     1561 cacatattta gcctgggtaa gcagaaggtt ttgatagtaa agtgaaattg gaagaagaaa
     1621 tacaacaaag atagattagt taattacatc ttgttcacta attggaatga aagataatgg
     1681 gttggacaaa tggaaggtac caaagaagaa ctctggtgac ccctgtgggc aatttgcctc
     1741 ttgtatggaa gtgattgtga tgccggactt tcaacaatgt aaagagctgc tctcccaccc
     1801 ctcaactcta caggagcaca tttcagtgat tctaaatggc agtatacaaa ttttaaagta
     1861 aaatattttt gatccttgtt aaaaaaaaaa aaaaaaaaaa aaaaa
//
