LOCUS       XM_039113287            2978 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L39-like
            (LOC120103562), mRNA.
ACCESSION   XM_039113287
VERSION     XM_039113287.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2978
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2978
                     /gene="LOC120103562"
                     /note="60S ribosomal protein L39-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120103562"
                     /db_xref="RGD:41369129"
     CDS             594..863
                     /gene="LOC120103562"
                     /codon_start=1
                     /product="60S ribosomal protein L39-like"
                     /protein_id="XP_038969215.1"
                     /db_xref="GeneID:120103562"
                     /db_xref="RGD:41369129"
                     /translation="MTYKSHTSSCERACLLRMKQLFSFPPTSCTLRLVRLLAVSSHKT
                     FRIKRFLAKKQKQNRSLPQWIRMKTGNKIRHNSRRRHWGRGKLDL"
ORIGIN      
        1 agtagtcaga ttacactgga gtgcaagaat gtgtgagtga gtaggaggga gaagcttgca
       61 gccccagggc tccaagcctc tctaaaatat gtctttgagt ctgtaggtaa acagaggcca
      121 tggaagggtt agggcagggg aagaagtcca cataatcaca tccattgaca gaaggttgat
      181 ttggtaataa ggtacaacac agagcttccc agaggcaagg aaaagcccaa gaatgcccag
      241 gtgagggaga tgtccagtga ggctagctac tgtatcagac cctcacgcct cagggccacg
      301 gcacagtgga catttctttt ccttttacac ttaaagctgt ggtgtgaggc tgaggcagtt
      361 taggatccag aaaaaaagga gcctccttca tcttcagctt gaaccgacac gcatctggca
      421 cagaagtcct ggactgcacg ggaaggtttc atgaaatgga tgctccactg agagcactca
      481 catggcctcg gccacatgca ctgagggctg ggttgaaggg tgctgtagtt cagataccta
      541 atgtttcctt aagaagcgta tgttgaagat tttggtcctt gactgcccag agaatgacct
      601 acaagagcca cacttcaagc tgtgaacgag cgtgtctatt aagaatgaaa cagcttttct
      661 cctttcctcc gacatcatgc acactacgcc tggttcggct tctcgccgtg tcttctcaca
      721 agaccttcag aatcaagcga ttcctagcca agaaacaaaa gcaaaatcgt tctcttcctc
      781 agtggattcg gatgaaaact ggtaacaaaa tcaggcacaa ctctaggagg agacactggg
      841 gaagagggaa gctggatctg taaggatcca cacaatgaaa agactgagag tttatactca
      901 ttgtggttgt caatcagtcc taccagatgg atttcaacat ttttaacctg agacttgtgt
      961 ctagattagg gtgcttgtcc aataataaaa tttagaactt gtcaaactga aaaaaaaaaa
     1021 agaatgaaac aagtcagagt aaaagaggaa gaaggggagg aggagaagga ggaggagaag
     1081 agggaggagg aggaggaaga gggggaggga gacagagaga cagagacaga gagatagcat
     1141 catcaaatct tagccggtac tcaagcatcc aacaggaact tgggaagctg aggcagtcag
     1201 ctagagttct cagctaagct ctctccatgg gtgagctcct tccccttttg cactgcaggt
     1261 atttttaata tcatgaagtc aacaacagat ccctctgttg gaactgactt accttctagc
     1321 tgctttcaag gacacagagt ttacagtgtt tgcctgattg ttcattcttt tccctcactg
     1381 tcacagagtt aagcagccca ccctgagaca agggcattgg aggacatttt gagacaagca
     1441 tgcttgggtt tgaaatggga tgagggacaa ccatgcacca tgcacataga accaaatgaa
     1501 aatttaccag tataaagcac ctggccatag cattactggg aggtggtaga atgtttaaga
     1561 ggtagggcct agggcgagaa tgtagctctt ttgagagaat gtttccctgt cagacaggaa
     1621 gctctgggtt ggatcatcag cacagcataa gaatgtggtg gcttttccca gtgattccag
     1681 cactcagaat gttgagacag gaggatcaga gttcaaggcc agctggggct gcgtagatcc
     1741 tgcttcaagt atacatagta gactagaata ggaaaaaaga aaaccggaag tggtagagac
     1801 tggtgaaagg aagttaggaa ggtgaggata tacccttgaa aagaacatgg gaccttctga
     1861 gtcactgctg tgtttcctct ctgtcccctc cagttatttc atttccctga ctcttcctcc
     1921 acctaactcc acacacacag agagacccca ctcctaacct ttaccatcat ctctgtgacc
     1981 agaatacttc ttcagagctc agacgtctta cagcagagat gaccagagtg tgtgtgttag
     2041 tctgatgaca ctgattctat atggccccaa tagtgactat atatactcac accaactgtg
     2101 tacatatgca ccccacatgc cagaccaatg ctaatggggt tgatttcaaa tcctcttgtt
     2161 cattgctggt atacagagag gcaggttaca gtattgtttt aaccttgtat cctgtaacct
     2221 tgtaaccatg tgtgggttct agtcaactcc attggatttt ctctatgact catgtcacct
     2281 gcaacaaaaa taactttatt tcttcctccc taatctgcgt gcgttctatt tccttttcat
     2341 gtcttaacac attccctatg acttctagta gtgttgaaaa gcagtgggct gggcttcttt
     2401 tgttccttct cttggttagg aagctttgag cttctcatca gtaagtaaga tgttggccat
     2461 gtggtttttt tgtagacatc ttttcaagct gaggaaatac ccctgtgttc ctaatttaca
     2521 gaatgttgga gagaggggtc aggaataaag tgttagactg tttgcttgtt aattggctag
     2581 tgagtgggtt gagtgtttgg ttggttggtt gagggcgtca tgtatatccc agtctgactt
     2641 caaacctgct acagtcaact tctgattctc ctgcttctac ctcccaagtg ctcagattac
     2701 agaagtgttc taccatggct tgtttttatg agtgctacag aggacacccc agactttatg
     2761 aataccaggt aagcactcta ccaactaaga tacattcccc tgcccatgag ctgaattttg
     2821 tcaattgttc tttgtcggct gttgataatg atcatatgat ttttattttt tcctagctta
     2881 ttgaaatgat gggtgccatt ttggctcatt ttcacaagct gaatagcttc aaattgctga
     2941 aagaaattcc actgactttt tttttttttt ttggttct
//
