LOCUS       XM_039111558             636 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interferon alpha-12-like
            (LOC120103163), mRNA.
ACCESSION   XM_039111558
VERSION     XM_039111558.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111558.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..636
                     /gene="LOC120103163"
                     /note="interferon alpha-12-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120103163"
                     /db_xref="RGD:41024711"
     CDS             7..561
                     /gene="LOC120103163"
                     /codon_start=1
                     /product="interferon alpha-12-like"
                     /protein_id="XP_038967486.1"
                     /db_xref="GeneID:120103163"
                     /db_xref="RGD:41024711"
                     /translation="MAMVCAFLTILVVMSHWSTCCLGCNLPRTHNLTVLKQMSRQSPV
                     SCLKDIQYFELPLEKVDAQQIQKSQAISVLETLTQQVLTLFESEESRAAWNETLRLSF
                     CNYLYQQLKDLEACQNQQVGVQEVPLTQEPSWLAVREYFGRITMYLKQKKHSPCAWEV
                     VRVEVGRALIYSDMFLAKLSEEKE"
ORIGIN      
        1 tccacgatgg ctatggtttg tgcattcctc acgattctgg tagttatgag ccactggtca
       61 acctgctgtc taggatgtaa cctgcctcgc actcataacc tcacagtcct gaaacaaatg
      121 agtcgacagt cccctgtctc ctgcctgaag gacatacaat actttgaact ccctttggag
      181 aaggtggatg cccagcagat ccagaagtct caagccatct ccgtcttgga aaccctgact
      241 cagcaggtcc tgaccctctt cgaatcagag gagtcacgtg ctgcttggaa tgaaaccctc
      301 cgattgtcat tctgcaatta cctctaccag cagctcaaag atcttgaagc ctgtcagaat
      361 cagcaggttg gagtgcagga agttcccttg acccaggaac cctcctggct ggctgtgagg
      421 gaatacttcg gcaggatcac catgtacctg aaacagaaga aacacagccc ctgtgcctgg
      481 gaagtggtta gagtagaagt cgggagagcc ctgatttatt cagatatgtt cctggcaaaa
      541 ctgagtgaag agaaggaatg agtagtgaga caaagtggag aggactctcc tggactacaa
      601 cattgcatct cacattatga gcaattattt tcaata
//
