LOCUS       XM_039111556             977 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interferon alpha-12-like
            (LOC120103161), mRNA.
ACCESSION   XM_039111556
VERSION     XM_039111556.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111556.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..977
                     /gene="LOC120103161"
                     /note="interferon alpha-12-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins, and 93% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120103161"
                     /db_xref="RGD:41097131"
     CDS             337..891
                     /gene="LOC120103161"
                     /codon_start=1
                     /product="interferon alpha-12-like"
                     /protein_id="XP_038967484.1"
                     /db_xref="GeneID:120103161"
                     /db_xref="RGD:41097131"
                     /translation="MAMVCAFLTILVVMSHWSTCCLGCNLPRTHNLTALKQMSRQSPV
                     SCLKDIQYFELPLEKVDAQQIQKSQAISVLETLTQQVLTLFESEESRAAWNETLRLSF
                     CNYLYQQLKDLEACQNQQVGVQEVPLTQEPSWLAVREYFGRITMYLKQKKHSPCAWEV
                     VRVEVGRALIYSDMFLAKLSEEKE"
ORIGIN      
        1 atgtctcata gagactgcat atttgtagaa tagtggttaa tgacaattta agtataattt
       61 aagagaaacc atgtaaagca gctctctgag ggtatcagtg aaagagaaag taatgatgga
      121 acccaaatcc ttgagaaaaa aattgccaga agcaagcaga gagtgaggta aagaaagtga
      181 aaagagaatt gggaagctag gggagggcat tcagaaaggg gaaagttgtg tttgccacta
      241 tttaagatag atgcacacag cagggttatc agagaaccta caggggaaga ctcaaacacg
      301 ctgctcagag agtcatcagc atctgcaaga tccacgatgg ctatggtttg tgcattcctc
      361 acgattctgg tagttatgag ccactggtca acctgctgtc taggatgtaa cctgcctcgc
      421 actcataacc tcacagccct gaaacaaatg agtcgacagt cccctgtctc ctgcctgaag
      481 gacatacaat actttgaact ccctttggag aaggtggatg cccagcagat ccagaagtct
      541 caagccatct ccgtcttgga aaccctgact cagcaggtcc tgaccctctt cgaatcagag
      601 gagtcacgtg ctgcttggaa tgaaaccctc cgattgtcat tctgcaatta cctctaccag
      661 cagctcaaag atcttgaagc ctgtcagaat cagcaggttg gagtgcagga agttcccttg
      721 acccaggaac cctcctggct ggctgtgagg gaatacttcg gcaggatcac catgtacctg
      781 aaacagaaga aacacagccc ctgtgcctgg gaagtggtta gagtagaagt cgggagagcc
      841 ctgatttatt cagatatgtt cctggcaaaa ctgagtgaag agaaggaatg agttctgaga
      901 caaagtggag aggattctcc tggactacaa cattgcatct cacattatga gcaattattt
      961 tcaatatgtt aaactct
//
