LOCUS       XM_039111555             925 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interferon alpha-12-like
            (LOC120103160), mRNA.
ACCESSION   XM_039111555
VERSION     XM_039111555.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111555.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..925
                     /gene="LOC120103160"
                     /note="interferon alpha-12-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120103160"
                     /db_xref="RGD:41162071"
     CDS             296..850
                     /gene="LOC120103160"
                     /codon_start=1
                     /product="interferon alpha-12-like"
                     /protein_id="XP_038967483.1"
                     /db_xref="GeneID:120103160"
                     /db_xref="RGD:41162071"
                     /translation="MAMVCAFLTILVVMSHWSTCCLGCNLPRTHNLTVLKQMSRQSPV
                     SCLKDIQYFELPLEKVDAQQIQKSQAISVLETLTQQVLTLFESEESRAAWNETLRLSF
                     CKYLYQQLKDLEACQNQQVGVQEVPLTQEPSWLAVREYFGRITMYLKQKKHSPCAWEV
                     VRVEVGRALIYSDMFLAKLSEEKE"
ORIGIN      
        1 gacaatttta atgtaattta agagaagtca tgtagcatag ctttctgagg gtggcagtga
       61 aagagaaagt aataatggaa cccaaatcct tgagaaaaaa attgccagaa gcaagcagag
      121 agtgaggtaa agaaagtgaa aagagaattg ggaagctagg ggagggcatt cagaaagggg
      181 aaagttgtgt ttgccactat ttaagataga tgcacacagc agggttatca gagaacctac
      241 aggggaagac tcaaacacgc tgctcagaga gacatcagca tctgcaagat ccacgatggc
      301 tatggtttgt gcattcctca cgattctggt agttatgagc cactggtcaa cctgctgtct
      361 aggatgtaac ctgcctcgca ctcataacct cacagtcctg aaacaaatga gtcgacagtc
      421 ccctgtctcc tgcctgaagg acatacaata ctttgaactc cctttggaga aggtggatgc
      481 ccagcagatc cagaagtctc aagccatctc cgtcttggaa accctgactc agcaggtcct
      541 gaccctcttc gaatcagagg agtcacgtgc tgcttggaat gaaaccctcc gattgtcatt
      601 ctgcaaatac ctctaccagc agctcaaaga tcttgaagcc tgtcagaatc agcaggttgg
      661 agtgcaggaa gttcccttga cccaggaacc ctcctggctg gctgtgaggg aatacttcgg
      721 caggatcacc atgtacctga aacagaagaa acacagcccc tgtgcctggg aagtggttag
      781 agtagaagtc gggagagccc tgatttattc agatatgttc ctggcaaaac tgagtgaaga
      841 gaaggaatga gtagtgagac aaagtggaga ggactctcct ggactacaac attgcatctc
      901 acattatgag caattatttt caata
//
