LOCUS       XM_039111553             572 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interferon alpha-12-like
            (LOC120103158), mRNA.
ACCESSION   XM_039111553
VERSION     XM_039111553.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111553.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..572
                     /gene="LOC120103158"
                     /note="interferon alpha-12-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 40
                     Proteins, and 61% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120103158"
                     /db_xref="RGD:41279671"
     CDS             18..572
                     /gene="LOC120103158"
                     /codon_start=1
                     /product="interferon alpha-12-like"
                     /protein_id="XP_038967481.1"
                     /db_xref="GeneID:120103158"
                     /db_xref="RGD:41279671"
                     /translation="MAMVCAFLTILVVMSHWSTCCLGCDLPRTHNLTVLKQMSRQSPV
                     SCLKDIKYFELPLEKVDAQQIQKSQAMSVLQTLTQQVLTLFESEESRAAWNETLLLSF
                     CKYLYQQLKDLEACQNQQVGVQEVPLTQEPSWLAVREYFGRITMYLKQKKHSPCAWEV
                     VRVEVGRALIYSDMFLAKLSEKKE"
ORIGIN      
        1 catctgcaag atccacgatg gctatggttt gtgcattcct cacgattctg gtagttatga
       61 gccactggtc aacctgctgt ctaggatgtg acctgcctcg cactcataac ctcacagtcc
      121 tgaaacaaat gagtcgacag tcccctgtct cctgcctgaa ggacataaaa tactttgaac
      181 tccctttgga gaaggtggat gcccagcaga tccagaagtc tcaagccatg tctgtcctgc
      241 aaactctgac tcagcaggtc ctgaccctct tcgaatcaga ggagtcacgt gctgcttgga
      301 atgaaaccct cctattgtca ttctgcaaat acctctacca gcagctcaaa gatcttgaag
      361 cctgtcagaa tcagcaggtt ggagtgcagg aagttccctt gacccaggaa ccctcctggc
      421 tggctgtgag ggaatacttc ggcaggatca ccatgtacct gaaacagaag aaacacagcc
      481 cctgtgcctg ggaagtggtt agagtagaag tcgggagagc cctgatttat tcagatatgt
      541 tcctggcaaa actgagtgaa aagaaggaat ga
//
