LOCUS       XM_039111546             557 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cytochrome c oxidase subunit 6B1-like
            (LOC120103152), mRNA.
ACCESSION   XM_039111546
VERSION     XM_039111546.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111546.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..557
                     /gene="LOC120103152"
                     /note="cytochrome c oxidase subunit 6B1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120103152"
                     /db_xref="RGD:40933017"
     CDS             133..426
                     /gene="LOC120103152"
                     /codon_start=1
                     /product="cytochrome c oxidase subunit 6B1-like"
                     /protein_id="XP_038967474.1"
                     /db_xref="GeneID:120103152"
                     /db_xref="RGD:40933017"
                     /translation="MAEEIKIKIKNYKTAPFDSRFPNQNQTKNCWQNYLDFRHCEKAM
                     TAKGGDVSVCEWYRRVYKSLCPVSWVSAWDDRIAEGTFPGKIRPGSAHLSYAL"
ORIGIN      
        1 agtgaagatg aacaggcaaa tggatggaat gagaaaatat catcccccac ccccaccccc
       61 gtctgacatt ggtgtctttg caaaggatca cattgaagta gcgctgctcc aggacagtct
      121 ttagaagtca ggatggctga agaaatcaag attaaaatca agaactacaa aactgccccc
      181 tttgacagcc gctttccaaa ccagaaccag actaagaact gctggcagaa ctacctggac
      241 ttccgccact gtgagaaggc aatgacagca aagggtggtg acgtctccgt gtgtgagtgg
      301 taccggcgag tgtacaagtc cctctgccct gtctcatggg tctcagcctg ggatgaccgc
      361 atagcagaag gcacatttcc tgggaagatc agacctggct ctgcccacct ctcctatgct
      421 ctttgacctt ctccccgata gaaaaggggg acctcagtat atgatggtcc ctacgctggg
      481 accctgaatc atgatgcaac tactaataaa aactcactgg aaaggtttca aaaaaaaaag
      541 aaagaaagaa aagaaaa
//
