LOCUS       XM_039111500            2095 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus protein PRRC2C-like (LOC120103108),
            mRNA.
ACCESSION   XM_039111500
VERSION     XM_039111500.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2095
                     /gene="LOC120103108"
                     /note="protein PRRC2C-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, and 94% coverage of the annotated genomic
                     feature by RNAseq alignments, including 103 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:120103108"
                     /db_xref="RGD:41354771"
     CDS             1..2064
                     /gene="LOC120103108"
                     /codon_start=1
                     /product="protein PRRC2C-like"
                     /protein_id="XP_038967428.1"
                     /db_xref="GeneID:120103108"
                     /db_xref="RGD:41354771"
                     /translation="MIATFQENQSTWLQDPKPLGTNYLPETRTHPHVVPVLSEKPTDK
                     VPEPKEQRQKQPWAGPIKAQKLPDLSLVENKEHKPGPIGKERSLKNRKVRDAQQVEPE
                     GQEKPSPAAVRSTDPGTAKETKAVSEMSAEIGAMISVSSPEYGTDAKESVTDYTTPSS
                     SLPNTVATNNAKMEDTLVNNVPLPSSLPLPKREAMQQSSSLTSVPPPTFSLTFKMESA
                     RKAWENSPNLREKGSPVTSTAPPIVSGVSSSASGPSTANYNSFSSASMPQIPVASVTP
                     TASLSGAGTYTTSSLSTKSTTTSDPPNICKVKPQQLQTSSLPSASHFSQLSCMPSLIA
                     QQQQSPQVYVSQSAAAQIPAFYMDTSHLFNTQHARLAPPSLAQQQGFQPGLSQPTSFQ
                     QIPIPIYAPLQGQHQAQLSLGAGPAVSQAQELFSSSIQPYRSQPAFMQSSLSQPSVVL
                     SGTALHNFPAVQHQELAKAQSGLAFQQTSNTQPIPILYEHQLGQASGLGSSQLIDTHL
                     LQARANLTQASNLYSGQVQQPGQTNFYNTAQSPSALQQVTVPLPASQLSLTNFGSTGQ
                     PLIALPQTLQPQLQHTTPQAQAQSLSRPAQVSQPFRGLIPAGTQHGMMATTGKMSEME
                     LKAFGSGIDIKPGTPPIGGRSTTPTSSPFRRELWEEDSATRHLVLGVGKAESRGSSVH
                     AAVLL"
ORIGIN      
        1 atgatagcaa ccttccaaga gaatcaaagt acatggctac aggaccctaa gcccttaggc
       61 acaaactacc taccagagac aagaacacac cctcatgtgg ttcctgtgct ttcagagaaa
      121 ccaactgaca aagttcctga acctaaagag cagcgtcaga aacagccttg ggcagggccc
      181 attaaagctc agaagcttcc agacttgagt ctggtagaaa acaaagaaca taaacctggt
      241 cccattggaa aggaacgatc attaaaaaat agaaaagtga gagatgccca acaggttgaa
      301 ccagaaggac aagagaaacc cagcccggct gcggtcagaa gcacagaccc tggaacagca
      361 aaggaaacca aagcagtctc agaaatgtct gctgagatcg gagcaatgat ctcggtgtcc
      421 tctccagaat atggcactga tgcaaaggag tctgtaacag actacactac accttcctct
      481 tctctgccta acactgtggc tactaataat gcaaagatgg aggatacttt ggttaataat
      541 gtgcccctgc ccagcagcct tcccctccct aagagggagg ccatgcaaca gagctccagc
      601 ctgacctcag ttcctcctcc tactttcagc ctcaccttca agatggagtc tgcacggaag
      661 gcatgggaaa attctccaaa tctaagggaa aaggggtccc cagtcacttc tacagcacct
      721 ccaattgtga gtggcgtcag cagtagtgcc agtggaccaa gcactgctaa ttacaactca
      781 ttttccagtg catcaatgcc tcagatccca gttgcctcgg tcactcctac agcatcgcta
      841 tcaggagctg gtacttacac tacctcttca ttgagtacaa aatctacaac cacgtcggac
      901 cctcctaata tttgtaaagt aaaaccccaa caattacaga ccagcagctt gccttctgcc
      961 agtcattttt cacagttaag ctgtatgcct tcccttattg cacagcaaca gcagagtcca
     1021 caagtttatg tgtctcagtc ggcagcagct caaatcccag ccttctatat ggatacaagt
     1081 catttattca atacccagca tgcgcgattg gctccgccat ccctggccca gcagcagggc
     1141 ttccaacctg gtctgtcgca gccaacatcc tttcagcaga ttccaatccc tatctatgcc
     1201 ccactacaag ggcagcatca agcccagctg agtttggggg ctgggcctgc tgtttcccag
     1261 gctcaggaat tattcagttc ttcaattcaa ccatataggt cgcagccagc ctttatgcaa
     1321 agcagccttt cccagccttc tgtggtcctc tctggtacag ctctccacaa cttcccagca
     1381 gtccagcacc aggagcttgc caaggcacag tcaggtcttg cctttcagca gacttcaaat
     1441 actcagccca tccctatact gtatgaacat cagctgggtc aggcatcagg actaggaagt
     1501 tctcagctga ttgatacaca tcttcttcag gcaagagcaa atcttactca agcgtcaaat
     1561 ctttactctg gacaagtaca gcagcctggt cagacaaatt tttataacac tgcccaatca
     1621 ccaagtgctc tccagcaggt tacagtacca ttaccagcat cccagctttc cttgactaat
     1681 tttggatcta caggacagcc tctgattgcc ttgcctcaga cacttcagcc ccagttacag
     1741 cacacaaccc cacaagcaca ggctcagagc ttgagccgtc ctgcccaagt aagccagcct
     1801 ttcagagggt taatccctgc tggaacgcag catggcatga tggcaaccac aggaaaaatg
     1861 tctgaaatgg aactaaaagc ctttgggagt ggcattgata tcaaaccagg aacaccacca
     1921 attggtggtc gaagcaccac gccaacatct agtccattca gaagagagct gtgggaagag
     1981 gactcagcca caagacattt ggtcctaggt gttggcaaag cagagagcag aggttcttca
     2041 gtccacgcag cggttcttct ctgagcagca acagagcaaa cagataggag gcaaa
//
