LOCUS       XM_039111491             432 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus palmitoyl-protein thioesterase 1-like
            (LOC120103098), mRNA.
ACCESSION   XM_039111491
VERSION     XM_039111491.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111491.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..432
                     /gene="LOC120103098"
                     /note="palmitoyl-protein thioesterase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins, and 40% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120103098"
                     /db_xref="RGD:41238809"
     CDS             1..351
                     /gene="LOC120103098"
                     /codon_start=1
                     /product="palmitoyl-protein thioesterase 1-like"
                     /protein_id="XP_038967419.1"
                     /db_xref="GeneID:120103098"
                     /db_xref="RGD:41238809"
                     /translation="MVLPQSLWLLFVCLLSWCCDAQELGLQDPDSESGPLPLVIWSEI
                     ENTISMNVFKKIVEKAVPGIYVLPMEIGKTMMKDVENKVLDASSEVCQILAQDPRLQE
                     GYIAVAFSKSLKFL"
ORIGIN      
        1 atggtgttac ctcaatccct gtggctcctc tttgtctgcc ttctgtcctg gtgctgtgat
       61 gcccaggagc tggggcttca ggaccctgat tcagaatcag gcccactacc tttggtgatc
      121 tggagtgaga tagaaaacac cataagcatg aatgtcttta aaaagattgt tgaaaaggca
      181 gttcctggaa tttatgtcct gccgatggag attgggaaga ctatgatgaa ggatgtggag
      241 aacaaggtcc tggatgccag ttccgaagtg tgtcagattc ttgctcagga tcctagactg
      301 caggagggct acattgctgt tgcattctcc aagagtctca agttcctgta agtatccttc
      361 ttttacatga taagactttc gagaaatcac tgtttcttct attcacatac attgactgta
      421 attatttaga ga
//
