LOCUS       XM_039111468            2181 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 37-like
            (LOC120103072), mRNA.
ACCESSION   XM_039111468
VERSION     XM_039111468.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 3% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-448               JACYVU010000161.1  50956489-50956936   c
            449-577             JACYVU010000161.1  50955679-50955807   c
            578-1710            JACYVU010000161.1  50913099-50914231   c
            1711-1712           "NN"               1-2
            1713-2181           JACYVU010000161.1  50912630-50913098   c
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2181
                     /gene="LOC120103072"
                     /note="zinc finger protein 37-like; The sequence of the
                     model RefSeq transcript was modified relative to its
                     source genomic sequence to represent the inferred CDS:
                     inserted 2 bases in 1 codon; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins, and 88% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120103072"
                     /db_xref="RGD:41380609"
     CDS             337..2181
                     /gene="LOC120103072"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1582..1584,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: zinc finger protein
                     37-like"
                     /protein_id="XP_038967396.1"
                     /db_xref="GeneID:120103072"
                     /db_xref="RGD:41380609"
                     /translation="MDMSVAFPQKEWEQLEPGQRNVYKDTKLENCSNPDSMGNQDPRQ
                     GLVSKLDGEEEWWSSGRVNKNSPSSLHRLKKTGTSAKVQQDGVQMEGKQKFQRKLTTE
                     VTFRKKSSNSKKSSECTLLEKKNVHSKHDPSEKRLHKSNLYGKNLNQKLDLPSQIKNS
                     AKKKSDTANEYRKSLSHCASDVNRDEISTRKKCDKSPNNKLFGKGDKNQTCKKCEKVC
                     RHSASHNKEDKIQTEEKRKSPCHSPSNPDKAPGSGKPYECNQCGKVLSHKQGLLDHQR
                     THTREKPYECNECWIAFSQKSQLVVHQRTHTGEKPYECVQCGKAHGHKHALTEHLRIR
                     TGEKPDKCNECGKTFRHSSNLMQHIRSHTGEKLYECKECGKSFRYNSSLTEHVRTHTG
                     KIPYECNECGKAFKYGSSLTKHMXIHTGEKPFECTECGKTFSKKSHLVIHQRTHTKMK
                     PYKCKECGXAFGHSSSLTYHLRTPTGGCPFEYNQCDKAFKQIEVLTQHQRVHTGEKSY
                     ECVEYGKAFSQKSHLIVHQRTHTGEKPFECYECGKAFNAKSPLVIHQRSHTGEKPYEC
                     VECGKAFKQNAHLTKHMKIHSEEQSQEEINVGTLTADWFGIVYPSRCI"
ORIGIN      
        1 cagtcctgga ctctgtggaa gatagaaaat ggcctgataa tggtgccata agccagggga
       61 ctgcaaccca gagaaaggtc cagacaaact cgctagtccc aggtcaacat ggaagctgga
      121 gttcacccta aagccttccc ccttcggtaa caaacacttt gtggaaatga gatgtgaaat
      181 agtagaaaca ttcaaagcca aggaagaaat tctaaacacc agagacagag ccaatccctt
      241 tgtaaagaag aagagaggga agaggtgagg gttgatacgg tcgaactgtc caattctctg
      301 tgaactgaat aagaatgata ggagtcagta acgttcatgg atatgtctgt ggcttttcct
      361 cagaaggaat gggagcagct ggaacctggg cagagaaacg tgtacaagga tacaaagcta
      421 gaaaactgca gcaatccaga ctcgatggga aatcaagatc ccagacaagg cctagtctct
      481 aagttggatg gagaagaaga gtggtggtct tcaggaaggg tgaataagaa cagcccaagt
      541 agtctgcaca gactcaagaa aacgggaacc agtgcaaagg tccaacaaga tggtgtgcag
      601 atggagggga agcagaaatt ccaaaggaaa ctcactacag aagtgacatt caggaagaaa
      661 agttcaaaca gtaagaaaag cagtgagtgt actttgttgg agaagaaaaa tgtccattca
      721 aaacatgatc cttctgaaaa aagattgcat aaatccaatt tgtatgggaa gaacttgaat
      781 cagaagttag acttgcccag tcagattaaa aactctgcga aaaagaaatc tgatacagct
      841 aatgaatata ggaaatcact cagccattgt gcatccgatg tgaacagaga tgagatttca
      901 actagaaaga aatgtgacaa gtcacccaac aataaattgt ttggtaaagg tgacaaaaac
      961 caaacatgca agaaatgtga gaaagtatgc cgtcatagcg catcccataa caaggaagac
     1021 aaaattcaga ccgaggagaa acggaaatca ccctgccata gtccatctaa tcccgacaag
     1081 gctccgggct ctgggaaacc gtatgaatgt aatcaatgtg ggaaggtcct cagccataaa
     1141 cagggtctcc ttgaccatca aagaactcat accagggaga aaccatatga atgtaacgaa
     1201 tgctggatag ctttcagcca aaagtcccaa cttgttgtgc atcagagaac tcacactggg
     1261 gaaaagccat acgagtgtgt ccagtgtggc aaagcccacg gtcacaaaca tgccctcact
     1321 gaacacctga gaatccggac tggagaaaag cccgacaaat gtaatgaatg tggcaaaacc
     1381 tttaggcata gctcaaacct tatgcaacac ataagatctc acacgggcga gaagctgtat
     1441 gagtgtaagg aatgtggcaa atccttcaga tataattcat ctctcaccga acatgtgaga
     1501 acacacacgg gcaaaatacc ctatgaatgt aatgaatgtg gcaaagcttt taagtatggc
     1561 tcatccctga ctaaacacat gtgaattcat acaggcgaga agccatttga atgtactgag
     1621 tgtgggaaga cttttagcaa aaagtcacac ctagttatcc atcagagaac tcacacgaag
     1681 atgaaacctt ataaatgtaa ggagtgcggc nnagcctttg gacatagctc atctcttacc
     1741 taccatctga gaactcccac cgggggttgc ccctttgaat ataatcaatg tgataaggcc
     1801 tttaagcaaa ttgaggttct tactcaacac cagagagttc atacaggaga gaaatcctat
     1861 gagtgtgtag aatatggaaa agcctttagt cagaagtcac acctcattgt acatcagaga
     1921 actcatacag gggagaagcc ctttgaatgt tatgagtgcg gaaaagcctt caatgcaaaa
     1981 tcaccacttg ttattcatca gagatcccac actggagaga aaccctatga gtgtgttgaa
     2041 tgtggtaaag ccttcaaaca aaatgctcat cttaccaaac atatgaaaat tcactcggaa
     2101 gagcaatctc aggaggaaat taatgtggga actctgacag ctgactggtt tggtattgtt
     2161 tatccttcaa gatgtattta g
//
