LOCUS       XM_039111466            1117 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 40S ribosomal protein S18-like
            (LOC120103069), mRNA.
ACCESSION   XM_039111466
VERSION     XM_039111466.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1117
                     /gene="LOC120103069"
                     /note="40S ribosomal protein S18-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins, and 71% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120103069"
                     /db_xref="RGD:40962879"
     CDS             578..1117
                     /gene="LOC120103069"
                     /codon_start=1
                     /product="40S ribosomal protein S18-like"
                     /protein_id="XP_038967394.1"
                     /db_xref="GeneID:120103069"
                     /db_xref="RGD:40962879"
                     /translation="MSLVISEKSQHILQVLNTNIDEQQETAFAITATKGAEQRYAHVV
                     LRKAGIDLTKMAGELTEDKVERVITIMQNPRQYEIPQKGVRDGRCSQVPANGLDNKLR
                     EELERLKKIRAHRGLRHFWGLHVHCQLTMSHGCRGYTVGASKKKREAPPAPAPGQALR
                     RHGQASACVCEGGLDESRG"
ORIGIN      
        1 gtgaattgaa gcaaaacaat aagatgtttt tacaatatac atgaacatat atacatgtgc
       61 acatgaggta ttgtgtgcac atccatggta cacacatagt agaataagtt gtagcatggg
      121 caaagtttct caatgaggac aagaatgacc agtcactaag tgcatcgaac tgcataacca
      181 aaaaatgatg ggccagccag atggctctgc gggtaaaggc atttgccatc aagactgatg
      241 acctgagttc tacccctaga agtctcaaga tgtaaacaga gaaatgactc tgaaagatgt
      301 ccctcttgca tgctatggca tgagtgcaca cacgtgcttg aacacacata cattacataa
      361 atgtagttta aaagtaaaaa ctgcttatcc tcagcctgga ggcgcaagcc tacaatctct
      421 gtatttggga ggtagaggca ggaaaactag gagtgcgagg tcagccatgg ctgtatgaga
      481 ccctgtctca aaacaaaacg taacaaaaca ggactcctca tcaaaaactc cattgtgtat
      541 ttagaagcac aggagtcaag gaggcctaca tgccgccatg tctctcgtga tctctgagaa
      601 gtcccagcac atcttgcagg tactcaacac caacatcgat gagcagcagg aaacagcctt
      661 cgccatcact gccactaagg gggcggagca gagatatgcc catgtggtgt tgaggaaagc
      721 aggcattgac ctcaccaaga tggctgggga gctcacggag gacaaggtgg agcgtgtaat
      781 cactatcatg cagaacccac gacagtacga gatcccacag aagggtgtga gggatgggag
      841 gtgcagccag gttccggcca acggtctaga caacaagctg cgtgaggagc tagagcggct
      901 gaagaaaatc cgagcccata gggggctgcg ccacttttgg ggccttcatg tccactgtca
      961 gctcaccatg agccatggct gcaggggcta tactgtgggt gcgtccaaaa agaaacgaga
     1021 ggccccaccg gcacccgcgc caggccaggc cctgcgccga cacggccagg cctctgcgtg
     1081 cgtatgcgag ggcgggctgg atgagtcacg cggataa
//
