LOCUS       XM_039111269             352 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus prothymosin alpha-like (LOC120102990),
            mRNA.
ACCESSION   XM_039111269
VERSION     XM_039111269.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..352
                     /gene="LOC120102990"
                     /note="prothymosin alpha-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 56% coverage of the annotated genomic feature
                     by RNAseq alignments"
                     /db_xref="GeneID:120102990"
                     /db_xref="RGD:41377667"
     CDS             74..352
                     /gene="LOC120102990"
                     /codon_start=1
                     /product="prothymosin alpha-like"
                     /protein_id="XP_038967197.1"
                     /db_xref="GeneID:120102990"
                     /db_xref="RGD:41377667"
                     /translation="MRNHVDAVVDTRLEVTNKDLEKKKVTEETGNGRAAPVDEENGEQ
                     GSDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDTKKWKAEQEE"
ORIGIN      
        1 ctcggacctc agcagctctc gccaaggccc tcaaattccc ttcctttctc cctggctgca
       61 cctgatcaca gacatgcgaa accacgtgga cgctgtggtg gacacccgtt tagaggtcac
      121 caacaaggac ttggagaaga agaaagtcac ggaggagaca gggaatggaa gagctgcacc
      181 tgtcgatgag gagaatgggg agcagggatc tgatgaggaa gaggaagagg aagaggaaga
      241 ggaagaggaa gaagaagaag aagaagaaga agaagaagaa gaagaagaag aagaagaaga
      301 agaagaagaa gaagaagaca ccaagaaatg gaaggctgag caggaggagt ag
//
