LOCUS       XM_039111236            1568 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glyceraldehyde-3-phosphate
            dehydrogenase-like (LOC120102977), mRNA.
ACCESSION   XM_039111236
VERSION     XM_039111236.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111236.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1568
                     /gene="LOC120102977"
                     /note="glyceraldehyde-3-phosphate dehydrogenase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein, and 98% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120102977"
                     /db_xref="RGD:41279700"
     CDS             24..341
                     /gene="LOC120102977"
                     /codon_start=1
                     /product="glyceraldehyde-3-phosphate dehydrogenase-like"
                     /protein_id="XP_038967164.1"
                     /db_xref="GeneID:120102977"
                     /db_xref="RGD:41279700"
                     /translation="MAFCVPTPNVSVVDLTCCLEKSAKYDDIKTVVKQVSEVPLKGIL
                     GYTENQVVSCDFNSNSHSSTFDAGAGIALNDNCVKLISWYDNEYGYSNRVVDLMAYMA
                     SKE"
ORIGIN      
        1 agtcatccca gagctgaact ggcatggcct tctgtgttcc tacccccaat gtatctgttg
       61 tggatctgac atgttgtctg gagaaatctg ccaagtatga cgacatcaag acggtggtga
      121 agcaggtgtc cgaggtccca ctaaagggca tcctgggcta cactgagaac caggttgtct
      181 cctgcgactt caacagcaac tcccattcct ccacttttga tgctggggct ggcattgctc
      241 tcaatgacaa ctgtgtaaag ctcatttcct ggtatgacaa tgaatatggc tacagcaaca
      301 gggtggtgga cctcatggcc tacatggcct ccaaggagta agaaaccctg gaccacccac
      361 cccagcccag caaggatact gagagcaaga gagagtccct cagttgctaa ggggtcccca
      421 tcccagctca gcccccaacc ctgagcacct ccctcacaat tccatcccag accccataat
      481 aacaggaggg gcctagggag ctctcccttc tctcttgaat actatcaata aagtttgctg
      541 caccccccaa aaaaaaacaa gaacaagaac aaaaaaatat ttgcgaactg cataaaatgg
      601 ttacagttat ctgaggtact aagaactaaa ctcagatccc ctgcaagagc ggccatggct
      661 ctgacccatg tagccacctc ttcacaggat ggtttcacta tgtaccccag gctggccttg
      721 aactcataat tctcctgtgt cagcctccag catgatggaa ttacaggtgt ttgccacctc
      781 tcccgactat gcatctcatt gcccgatggg aagttattgt cttagaccct taattcagaa
      841 ggccagggat gtcccgagtg gccgggtgaa gacgactagc taatcacaat ctttactgac
      901 cttggaaact gcagagaagt cgcttctctg agcgaggatt cgagaaagaa catccagata
      961 agccggggct gtgtcagcga tcacgtggga gggcgggtga ctgaaaactt acagggagtt
     1021 atctgagccg taacaaatag ttgttcttac atagaaagaa aatcgagatg tggttttgtg
     1081 tagctgaagc tgacctcagc tcatttgaac ttctttctgg tcctcgtgcc tccatatccc
     1141 gagtgctgtc gtgcaaggct acatcactac acttggcttc tgcggtgctg gggatcgaat
     1201 ctgaggcttt gtacacgcta ggcaaatgct ctacagctgg gcgaccgccc cagccctgac
     1261 ttcacaattt ttacatttat ttatttattt atttatttat ttatttattt atttatattc
     1321 tttcactttt ttatctttga cataacaggg aaactttatt tagatcattt acgttagaaa
     1381 ggaatacgct gttctgattg acaggagcac aaagggggag gtactcaagg acctaaaatg
     1441 cttttggttt aatatacgtg tgtgtggtgg tttgaatgaa aatgtccccc acaggctcat
     1501 agggaatggc actgttagga gaggtggccc tgctggaata ggtgtggcct tgttggagga
     1561 agtgtgtc
//
