LOCUS       XM_039111229             944 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus prothymosin alpha-like (LOC120102971),
            mRNA.
ACCESSION   XM_039111229
VERSION     XM_039111229.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111229.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..944
                     /gene="LOC120102971"
                     /note="prothymosin alpha-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120102971"
                     /db_xref="RGD:41369998"
     CDS             354..929
                     /gene="LOC120102971"
                     /codon_start=1
                     /product="prothymosin alpha-like"
                     /protein_id="XP_038967157.1"
                     /db_xref="GeneID:120102971"
                     /db_xref="RGD:41369998"
                     /translation="MSDAAVDTSSEITTKDSKEKKEAVEEAENGRNAPANGNTRNEEN
                     GEQEADNEVDEEEEEGGEEEEEEEGDGEEEDGDEDEAEAPTGKRVTDDDDGGGDDDDD
                     DDDTKKQKTDENDQTAKGKANLTHRDLFTLHFPSQNLNVGHLRVESRVVPPTDDMRSP
                     PHRQNHNMNWQHGRRKEPERPRPCFFFLKVL"
ORIGIN      
        1 atcctctcat taaaatattc cgacggtgaa atccatttta aagaagacag caggccagtc
       61 ctgcagcgca ccctgctggc tgcagttctt acatgctttg gaagttctgc gccctctgct
      121 tgcaccattt atttaactat ttttgtcagt ggactggttt gagagttttg gttttgagtg
      181 gctgctcgga aaagccatct ttgtattgtt cccggatcgt gctccacgct cactgcagcc
      241 accttcgcca cccaccacct cctccaacgc ggactctggc agctttctcg ccagagtcct
      301 cgaaattcga ctaattcctt actcacagca tcggaccacc ggcgtgctcc accatgtcag
      361 acgcggcagt ggacaccagc tcggagatca ccaccaagga ttcgaaggag aagaaggaag
      421 ctgtggagga ggcagagaat ggaagaaatg cacctgccaa tgggaacact cgaaatgagg
      481 aaaatgggga gcaggaggct gacaatgagg tagatgaaga agaggaagaa ggtggggagg
      541 aagaggagga ggaggaaggt gatggtgagg aagaggatgg agacgaagat gaggctgaag
      601 ctcctacggg caagcgggta actgatgatg atgatggtgg tggtgatgat gatgatgatg
      661 atgatgacac caagaagcag aagactgatg agaatgacca gacagcaaaa ggaaaggcta
      721 accttacgca ccgtgaccta ttcaccctcc acttcccgtc tcagaattta aacgttggtc
      781 accttcgagt agagagtaga gtagtgccac ccacagatga catgcgctct ccaccacacc
      841 gccagaacca caacatgaat tggcaacatg ggaggagaaa agaaccagaa cgtcctaggc
      901 cctgcttttt tttcttaaaa gtactttaaa agaaaaattt gttt
//
