LOCUS       XM_039111060            5769 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus major urinary protein-like
            (LOC120102889), transcript variant X2, mRNA.
ACCESSION   XM_039111060
VERSION     XM_039111060.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5769
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5769
                     /gene="LOC120102889"
                     /note="major urinary protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:120102889"
                     /db_xref="RGD:41225436"
     CDS             4892..5413
                     /gene="LOC120102889"
                     /codon_start=1
                     /product="major urinary protein"
                     /protein_id="XP_038966988.1"
                     /db_xref="GeneID:120102889"
                     /db_xref="RGD:41225436"
                     /translation="MSKVLEVECGHHQQRDCPDREAILFPTNMKLLLLLLRLGLNLVC
                     GHAEEASFERGNLDVDKLNGDWFSIVVASNKREKIEENGSMRVFMQHIDVLENFLGFK
                     FRIKVNGECRELYMVAYRTPKDGEYFVEFDGGNTVNILKTDYYKYLILQIINYKNGRT
                     YLVTKLWDRCLQA"
ORIGIN      
        1 aagaaggcag gctcacaatg cacagggaac gagccaggaa gccatgttct cctaaggcct
       61 ctgctttagt ccctgcctcc aagttctctc atagagtccc cccaccacac acacacacac
      121 acacacacac acacacacac acacacacac acacacacaa aacacacaca cacacaacct
      181 cccttcatga tagactgtaa gctaaaataa accctttcct cctcaagttg cttttggtca
      241 tgatattaat cgcaataact ctaaattgta tctatataag gatacagaat accaatgtgt
      301 tcttaacacc tcacattctc tgaacaccat gtactttctc tatagacatc cctctaattc
      361 cagctatcga gagtaagctt acatgatctc ttgccaacat tttccagtaa cttccttcat
      421 gatctcctgc ctaaaggttc tcaaccttcc tgatgctatg accctttaat acagttcctc
      481 atgatatggt ggcctccaac cataaactta tttccttgct gcttcataaa tgtcattttg
      541 ctgcttttat taattgaaat gtaaatatct gatatgcagg atataggaca tgtgacccag
      601 gtgggggtca caacccaaac attgagaacc catgtagggt ctcgatccac acgtttgaga
      661 accactgata gcaacttttt tctctcttct cctgccttcc tgttggtctt tgttatccaa
      721 atgcagccag atgaactttg aaagcacacc tctgaccatg ttccgactgt aattctaaaa
      781 tgcttcaggt ccttcccaga tacatgaaaa ccaaccccta tcaagctcct cacgggccca
      841 cataagctga tccgggataa gagtgcccac aaaaaataca tacattggaa gctttaccca
      901 tagtgcctga gggtgtgatt tggtgtaatt atggtaagat gaggtcttca gggtgaacct
      961 aagtcaagat gactgacaag tgtcctcaaa agaaaagact aggatacaag atgggtcaga
     1021 gaagagactt cctgaagacc cgggaacacg attccaccaa tgaggaagag ctcacaagaa
     1081 gcaagcccca tcgaacacct tgctcccaga gttctagctg ccagaaagga gaaagtataa
     1141 tttttttatg tttttcttta ttcattttat gtacatgagt acactgtacg tatgagacac
     1201 accagaagag ggcatcggat cccactacag atggttgtga gccaccatat ggttgctggg
     1261 aattgaactc atgacctctg gaagagtagt cagtgctctt aaccgctgag ccatctctcc
     1321 agccccgaaa gtctaatttt tgactatgct gatttcaacc ttcgtgatgt aggcacctct
     1381 tgcttctgtc ttccttttat tcttctttct tcattactca tactgcatga gttcgagagg
     1441 gcagcccatg caaactgaca caactccctt tctagccttg actcatttcg taattcctgt
     1501 gttcactgtg ttctagcaag gtttcctttg gctctctgaa ctatttgtac tcttgtttgc
     1561 catggccttc acgtatgtat ccattctccc cacactctag aaggccctct gcctagttcc
     1621 tgttagtctg gtgaattctc ttgtgcttaa aacaatagat tattttatgt gtatgaatgt
     1681 tttgcttgca tgtatgtctg tgcagtacat gcatgcagtg cccacatagg gtgtcggatc
     1741 cctggaacta gacttatgga ttcctgtggg tgctgggaat ttaaccggga gtcatctctc
     1801 cagtctctcc ctcttctggt atcatcctgc tttccctcca tcagccattg gtgactgaag
     1861 gctaacactg ccaaggcgct gaccggtctg agcatgcagt agtgtggacg catggttcct
     1921 ggcctcagtt cccctgagtt aaatatcttt gtattgcaat gttcctgtga cagataccta
     1981 attgggcaga ggactcgaga cctgtgagga aagactactc atggatagaa gaatgaaatc
     2041 ccagacatca tgatgcagta tagcttagag tccaccccca accttgaaga aaagactgct
     2101 tgtttgtgag gagtgtgaat agctagccgt cccaactgtt aactgcttca gactcccttg
     2161 tcttcgagct gatatggtgg tctctttgag gtgcacatcc ccccaccccc catgatcgag
     2221 aaaaactgtg gcatagcatt tctgcctaac acaggataac ttcccttcct tgattctgct
     2281 gtctcctagc tcccttcgtc cttcacgagt tcctggccag taatttcttt gtcccaaaag
     2341 tttgtttctg cctgttttct ggggaccgct ctaggttttg ggagttaagc aggtggattc
     2401 cagtgactcc aagcatcctc tgacactgac agaagcaggt gctttagaac tgatgttgag
     2461 ctggggtcag cagtcctatc tgtcactctg ctggagggac tacagaatat ttcctctctg
     2521 ggacatgaat caaataagcc cgagttcatt gatgttcttt ttggccccaa acaccctggc
     2581 accatgtaag tgactcgaat gtttccgcag gctttctgaa tggtttattt attcaattag
     2641 ttgagggtaa gactcaggta aaggtcatta aatcattttc ctattagtca gtttcagaaa
     2701 tgctagctag ttacaaatga gccattagct gttacacgta cacaccttaa acctcttata
     2761 cacatacttt gtctagccat ttcttaacag cctcagtgct tcagtcacat gaacagccca
     2821 catgtactga ggagtgttaa gtggaaggga ctggctcttg ccttctgctg gggaagcatc
     2881 ttctcgttca ttactagaaa agcagtaatc tatagccaga catggtgcta caacctgtaa
     2941 tcttagcatt caggaagctg gagctggggg agtgccacag attcaagacc attcagaaac
     3001 tcaggaagct caaggcaagc ctctatgtga gttgctggga agacagatca gtggagaagt
     3061 actggctgtg agggctgtgc aggctcccag caaggtcaga gctgatgctc agaactcaca
     3121 ttaaaaagct ggtcatggct gcctttaacc ccaccactag gtagatggtg gagactggag
     3181 gattggtggg acttactggc cagccagcct atctgaaaca cactaagtcc cagattcaga
     3241 gggagaccct gtctgaaggg gataaagtaa aaggagacag agggagacaa ttggcaccct
     3301 gttctgactc ctgcgtatcc tagcaaaggc acaggcgtgt gcacatgtgt gcacatgtgt
     3361 gcacacacac catagcataa tcaaccaaaa aaagaagagg aggggagagg agcaggagaa
     3421 agaggaagag gagaaaagaa aaatgttaat cccctagtca agcatttacc aaatacttgt
     3481 agaccaagag gggccagtag tcatgtctca ttcaatctca agctacatcc actcctccat
     3541 attttaaaga aacccacgtg cagtttcagt ctgatgtgtc tggagctctg cagtgctgtt
     3601 tattcctctt tctcctattt aaccatcctc ccttcaggta aaaccatccc aacctgtgta
     3661 gtggagttaa taagaacaaa ggctcctgag tcagatggac aggcttgggt ttaaatctaa
     3721 gttctcttgc tgactggctg tatggccttg taagttactt gatctttctg agtcttagct
     3781 aacactatgg aaagatgaaa ataaatagta catactatag agagttgatg caaagtggaa
     3841 ataaaaccta atgaggactt gcctccttct tgaattcttt atttccccac atcaaacact
     3901 attttatgtt tctagttcca gggtaaatac aatttatatg gatacaaaaa atatttatag
     3961 ctgtgtgtct ttgtaagcag actcgacatc atttctactt ggacctccat cagcaaattt
     4021 gactttgaac aatacctttg ttttctttaa tgatgagatt atttccagtc agttaaagtc
     4081 caacgttctc tgaggtaaac agctgaaggt gtttatctta ccaagttagc agtttgcatt
     4141 ctgaggtcaa gcttttgggg tgcgttggga tgggggggct gtcagctcag cttcagaaga
     4201 cccttcctga taatcttttt aaattatgat ttattatttt tatgcatatg tgcctgaatg
     4261 agtgagttca tatgtaccac atgtgtacag gagatcacag gggccaaaag agggtcattt
     4321 cctgtgactg gagctagagt cagttgttag atgccatgtg agtgctagga attgaacctg
     4381 ggtcctcagc aagaaaaggt ttcaaagaat ctgtctcctt cttttgacct ccttctgact
     4441 ttcttggccc caggtgtgtg catggtacac atgcaaaacc aatgctcata cgcatgaaat
     4501 ttgaatgaat cttttcaaag aaaacccaag taattcagct tcttccacac tccactcaag
     4561 tcttgaagca aagatactct tcatgcttga ccttccagtt cagtacccgc ccactccatt
     4621 actggctttc tgattccaag tcagatccaa aggtgcctct ggatctagat ggccctctag
     4681 aacacccact gtttttcttg ggaatatgtt ttgtgaaatg tatgagtgag aaaatcaatc
     4741 cctaggagat gaggttgcca agtttgaaaa gggcaggaac aatccttggc ttcacatcag
     4801 tacatgagaa aacattccac aaagcctgag gtaaggaggc ccacatgaga aggaaaaaaa
     4861 aacaccactc gaacccagag agagtataaa gatgagcaaa gtccttgagg tggagtgtgg
     4921 gcaccatcag cagagggatt gtcccgacag agaggcaatt ctattcccta ccaacatgaa
     4981 gctgttgctg ctgctgctgc gtctgggcct gaacctggtc tgtggccatg cagaagaagc
     5041 tagtttcgag agagggaacc tcgatgtgga caagctcaat ggggattggt tttctattgt
     5101 cgtggcctct aacaaaagag agaagataga agagaatggc agcatgagag tttttatgca
     5161 gcacatcgat gtcttggaga atttcttagg cttcaagttc cgtattaagg taaatggaga
     5221 gtgcagggaa ctatatatgg ttgcctacag aacaccaaaa gatggcgaat attttgttga
     5281 gtttgacgga gggaatacag ttaatatact taagacagac tattacaaat atctcatctt
     5341 acaaatcatt aattacaaga acgggagaac ttacctggtg acgaagctct gggatcgctg
     5401 tctccaggcc tgaggttgaa gaaaggcctg agcctccaga gtgcctctct gtccagaagt
     5461 caatccaaga cgtgcgtaat gggttcctgt attctttctt cctggattac tcagtgctga
     5521 gtggagactt ctcaccagga ttccagcatc accatttcct gtccatggag catccttaga
     5581 caaattctgc gatctgattt ccatcttgtg tcacagaaaa gtgcaatccc ggtctctcca
     5641 gtatcttccc tagttagcca ggacaacaca tcgagaatta aaagctttct taaatttctc
     5701 tttgccccac ccatgatcat tccgcacaaa tttcttgctc ttgcagttca ataaatgatt
     5761 acccttgca
//
