LOCUS       XM_039110947            2359 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC120102834
            (LOC120102834), transcript variant X2, mRNA.
ACCESSION   XM_039110947
VERSION     XM_039110947.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2359
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2359
                     /gene="LOC120102834"
                     /note="uncharacterized LOC120102834; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 17 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:120102834"
                     /db_xref="RGD:41195959"
     CDS             644..1369
                     /gene="LOC120102834"
                     /codon_start=1
                     /product="uncharacterized protein LOC120102834"
                     /protein_id="XP_038966875.1"
                     /db_xref="GeneID:120102834"
                     /db_xref="RGD:41195959"
                     /translation="MLTVIGMVVNSASPRPVPATRFPARPPTQLARWHLHCTRLKSPT
                     IRRGLPAANKTSCGRCWPAGPEDQGAAPPPSRCQNVRGHSPTRARPETDRLVLRIADS
                     RFAQRDAGRGARGGGRQADAGCDAEPGARRAQLPLLPPRSLPPLLSVVAAVADKCDVG
                     RRGLPLSQAASASALPALARSRGRRLHLSAGRPGVRRGAGAPRAEHSAHSARTRSAAA
                     RARTRGRRGRSGGRRRRGRDQSN"
ORIGIN      
        1 caccctagaa ggccagggcg gctgggccag cggggcactg aggtacagtg gaagcgatgc
       61 tacccaggtg tccccggctg tgaagctccg gacttgcctc cggtcggaga gttagctcag
      121 agaagccgcc tgatcatcct agtggggctt cccatcacag caccccagac acccgagtaa
      181 gagaaagttg tcaggcgggt cgcccagcgc ctgggtacag ctcacgggac tcctaaccaa
      241 attgtagccc agaaccaaat taggggtctt catcttgttc ctaggattaa ggagtccacc
      301 atgaaaataa gcctttcgct tctagtttta aaaacccacc atgagggtgg gaagccacct
      361 gccaaacaca tcgtggacca attgaccagt tgtttagtcg aaggagacat gcatgtcttt
      421 ttatgttctc cttcgttgaa aaagaattaa aataaaataa aaagagagtg cggggaatct
      481 aaagcaaaag cggaggcaaa tgctgtcttg tctggtccgc gaagttcagt gccatcgcag
      541 actccagaac cctcgatgtt cttctttgcc ctgctttacg cagtcctact ctagttgagc
      601 gtcaagttca gcccagagcc tcttggtcca attaatccga acgatgctga cggtcatcgg
      661 catggtagtt aacagtgcca gcccaaggcc ggtcccagcc acccgctttc cagcccgccc
      721 gccgacccag ctcgcccgtt ggcacttaca ctgcacaagg ctgaagagtc ccaccatccg
      781 ccgcgggctc ccagctgcaa ataaaacttc ctgcggtcgg tgctggccgg cggggccaga
      841 ggaccagggc gcggcgccgc ctccctcgcg atgccagaat gtccgtggcc actcgcccac
      901 tcgcgctcgc ccagagaccg accgcctagt cttgaggatt gcggacagcc gcttcgcaca
      961 gcgagatgca gggcgaggag cccggggtgg cggacgccag gcagacgcag gctgcgacgc
     1021 ggagcccggc gcgcgccgag ctcagctccc cctcctcccg cctcgctccc tccctccgct
     1081 cctctctgtt gttgctgctg tggcagacaa atgtgatgtg gggcgcaggg gattgccact
     1141 gtcacaggcg gcgtctgcgt ccgccttgcc cgccctcgct cgctctcgag gaaggcgact
     1201 gcatttatct gcagggcgtc cgggcgtccg ccggggagca ggagcgccgc gcgcagagca
     1261 cagcgcccac agcgcccgca ccaggtcggc tgcagcgcgc gcccgcaccc gggggcgccg
     1321 cggccgctcg ggagggaggc ggcggcgtgg ccgcgaccag agcaactaaa gcaacccaca
     1381 attgcatttc ctttcaagcc ggtaacttaa gttacgatgg caattgattt actttaaaaa
     1441 tatagatttg ctggcttcct ttcagacgta cgaaatcaaa atctgcaaga tctggatcca
     1501 agttttatgc tttaaacacc tttcctggta actgggacac ttcaggcgca gctcctctcc
     1561 accagagacc actgaagcat gaacacttct cttcaaggcc ggactagcag cgagacctca
     1621 gatattaaca tctgtgtctg taaagtggca caattgctat aaataatctc tcagaccttc
     1681 cctgtgtcta tggcctgcca cgagccttta tcacccaatc cagagtacat caggctgaga
     1741 acgtgaatag cacttcacag attttaagat actccccctt tatatcacac ctcagcccat
     1801 tagtgttgaa agtacaaggg gcaagaatta gtctcatctg ttttctgatg aaaacactct
     1861 agagagctgg ggttatggta caaccttaga gcgcttgcct gggatgacgt aggccccagt
     1921 ttcagtcccc agcacttcaa tagcagcaac gaaacaaaac tcaaactcag tacctaacta
     1981 acagaaagcc cagctttgat taagaaaaaa ggagtaagat ttctcccagg tgaaacatga
     2041 actgcaccat ggtttcagac agcagcagct accatgtttg taagtgtttt gatccaacta
     2101 tcattaaggt agtatataaa acaagtatga tacaaataat ttttctgttg tatgtttccc
     2161 agaagaaacc tgtcttggtg atgaataacc ttcctttgtg gcaggcctcc tacaacccac
     2221 ccccatcttg atctcagcct tgttctgggt ctcactgaag cattctttcc cccagttgtt
     2281 tgcattgcta caaaaccaac ctcagtacgc gagtggctca ccctcagtag tgcttccatt
     2341 aaatcagcta gtgcagtgt
//
