LOCUS       XM_039110936            3332 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RNA-binding protein 12B-A-like
            (LOC120102832), transcript variant X1, mRNA.
ACCESSION   XM_039110936
VERSION     XM_039110936.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039110936.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3332
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3332
                     /gene="LOC120102832"
                     /note="RNA-binding protein 12B-A-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 17 ESTs, 2 long SRA reads, 7 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 198 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:120102832"
                     /db_xref="RGD:41100894"
     CDS             218..2749
                     /gene="LOC120102832"
                     /codon_start=1
                     /product="RNA-binding protein 12B-A-like"
                     /protein_id="XP_038966864.1"
                     /db_xref="GeneID:120102832"
                     /db_xref="RGD:41100894"
                     /translation="MAVVIRLQGLPFIAGPVDIRHFFKGLTIPDGGVHVIGGKAGEAF
                     IIFATDEDARRAISRSGGFIKDSSVELFLSSKVEMQKTIDMKRSARVGRGRPGPEASG
                     VGNMYHFIDALKEEERYSGYGSAVNPDAGFHINGTGLDLRPRKTRPLKAENPYLFLRG
                     LPYLVNEDDVRVFFSGLCVDGVILLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMG
                     SRFIEVMQGSEQQWIEFGGTASKGGDTLHKRSEEHSPSRRLNDRYFWKRSRSKSPRTR
                     SRSPLGFYVHLRNLSLHTNKRDLRYLFRDTDLSNDQIKFLYKDDRRTRYAFVMFKNQK
                     DYNTALGLHKTVLQYRPVLIDPISRKEMVKIIECYEKKRPESLEEERPGRVSQKYSEE
                     GFPGSGQKLCIYIRNLPFDVTKGEVQKFFADFSLVEDDIYLLSDDKGIGLGEALVRFK
                     SEEQAMKAERLNRQRFLGTEVLLRLISEEQMQEFGVNFSWMSNEKTQACSRSHDGDDC
                     SCLFDLKDPLATGQSFGQSESIRYQPKDFRKMGHFKHPRGYFQQSDRHSPEDFRHSPE
                     DFGHPREEHSRRSREEDWRRPLEDWKWPLEDDFRQSREKDCRQLPEKDFRCPWEEDFR
                     RPSQEHFRRSYQEHIRQPPHEHFRYSREEDSRHVADEDFRYPADEDFRTSQEDLRCPT
                     DEDFRQVCLEDHREVPEGDLRRSDKFRLPGEDFWTSSDFRGHHPFVNFGHLEGGKFDF
                     GKYNIGCFSEGKVASDLNLNCRSGGIIRVMISNLPFKANANEILDFFHGYKVIPDSVS
                     IQYNEEGLPLGEAIVAMTNYNEALAAVKDLSGRPVGPRKVKLSLL"
ORIGIN      
        1 gcgcctgagc agaaaaacgg tgcgtcggtt tattcagacc cgaggaaagt gtgatctcca
       61 tttttgtccc ggccgttggg gcctagttgg ccttgtggat actgcttcaa gaaggagcgt
      121 cccagtctcc gtttgtgtgt taagttgctt ttacagagta agcaggtctc caagaaataa
      181 aaggaaaagg tgattattgc tgtggcttga gctcagcatg gctgtagtca tccgtttaca
      241 ggggcttcct tttattgcgg gtcctgtgga catccgtcac ttcttcaagg gattgactat
      301 tcctgatgga ggagtgcatg tgattggagg gaaagctggg gaggctttta taatttttgc
      361 cacggatgaa gacgcaagac gtgccataag tcgctcagga gggtttatca aggattcgtc
      421 tgtagagctt tttctgagta gcaaggtaga aatgcagaag accatagaca tgaaaagaag
      481 tgctcgtgta ggaagagggc gaccaggacc tgaggcctca ggggttggca acatgtatca
      541 ttttatcgat gctctgaagg aagaggaacg ttattctgga tatggctctg cagttaatcc
      601 agatgctggg tttcatataa atggtacagg acttgacttg aggccaagaa agaccaggcc
      661 actgaaggct gagaatcctt acttgttcct tcgaggtttg ccttacttag taaatgaaga
      721 tgatgtccgt gtctttttct ctggtttgtg tgtagatgga gtaattctct taaaacacca
      781 tgatgggcga aataatggcg atgctatagt aaaatttgct tcatgtgttg atgcttcagg
      841 aggtcttaaa tgccatagaa gtttcatggg ttccagattt atagaagtca tgcagggttc
      901 agaacaacag tggattgaat ttggtggtac tgcaagcaag ggcggtgaca ccctgcataa
      961 gagatctgaa gaacattctc cttcaaggag gttaaatgac aggtactttt ggaaacggtc
     1021 tcgttcaaag tctcccagaa cacgttctcg ctctcctctt ggattttatg ttcacttaag
     1081 aaatctgtcc ttacatacta acaaaagaga tctaaggtat ctctttagag atactgacct
     1141 gagtaacgac cagattaagt ttttatataa agatgatcga agaacgcggt atgcctttgt
     1201 gatgttcaag aatcaaaaag actataacac tgccctgggt ttgcataaga ctgttttaca
     1261 atatcgtcca gttcttatcg atccaatttc tagaaaggaa atggtgaaaa tcattgaatg
     1321 ctatgaaaag aagagaccag agtctttgga ggaagagagg ccaggacgtg tttcacaaaa
     1381 gtactctgaa gaaggcttcc ctggctctgg tcagaagctg tgcatatata taagaaattt
     1441 accatttgat gttacaaaag gtgaagtgca gaagttcttt gcagactttt ctcttgttga
     1501 ggatgacatt tatttgcttt ctgatgacaa gggaattggt ttgggagaag cactggtgag
     1561 atttaaatcg gaagagcagg ccatgaaagc tgaacgtttg aaccggcaga gattcttggg
     1621 gacagaggtg ttgttaagac ttatatctga ggaacaaatg caggagtttg gtgtaaattt
     1681 ttcctggatg tcaaatgaga agacacaagc ctgctcccgg tcacatgatg gagatgactg
     1741 ttcctgtctg tttgacttaa aagatccact ggcaacaggc cagtcctttg gccagtctga
     1801 aagcattcgt tatcagccaa aagacttcag gaaaatgggt catttcaagc atccccgagg
     1861 gtatttccag cagtctgaca ggcactctcc tgaggacttc aggcactctc ctgaagactt
     1921 tggacacccc agggaggaac atagcaggcg ctctagggag gaagactgga gacggcccct
     1981 tgaggattgg aaatggccac tggaagatga ttttaggcag tctcgtgaaa aagattgtag
     2041 gcagctacca gagaaggatt tcagatgccc ttgggaagaa gacttccgac ggccatctca
     2101 ggagcacttc aggcgttcat atcaggagca cattagacag ccaccccatg aacatttcag
     2161 atattcccga gaggaagatt ccaggcatgt ggcagatgaa gattttaggt accctgctga
     2221 tgaggacttc aggacctccc aagaagattt gagatgtccc actgatgagg actttaggca
     2281 ggtgtgtctg gaagaccaca gggaagttcc tgagggggat cttagacgtt ctgataagtt
     2341 tagacttcct ggagaggatt tttggacctc atctgatttc agaggtcacc atccttttgt
     2401 gaactttggt cacctagaag gtggcaaatt tgattttgga aagtataaca taggatgttt
     2461 ttcagaggga aaagttgcat ctgatctaaa tttaaactgt aggtcaggtg gaataattcg
     2521 tgtcatgatc tcgaatcttc cgttcaaagc caatgctaat gaaattctag actttttcca
     2581 tggttataaa gtcatacctg attcagtttc aatacaatat aatgaggaag gattaccttt
     2641 aggagaagct attgttgcta tgacaaatta taatgaagct ctagctgctg ttaaagatct
     2701 aagtggtaga ccagttggtc cccgcaaggt taagctcagt ttgctttaga ggttcttttt
     2761 aagtaaacag ttttcttcta ctctattgat gcagtgaatg tatagttttg taaagtttat
     2821 ttgtaaatat ttaaagattt tatttttact tgtgaataga agaaaatttt gttatgtaat
     2881 tcttgtttcg ttttgcttac aaatgaacat gcttttaccc ctgaatttaa aattacacat
     2941 tttccatttt ttaggggaag gagagagagt aaatatcctg aatgcaagag gttcattgat
     3001 gttatggata acactcaatc ttggaaagag tagttttgtt tgtagaaggt gaatttatct
     3061 ttgctgctgt ggataaatta atctttgatt tgttttttcc atctttcact cagactgtat
     3121 aaggaaatga aggctgactg attaacaagt ttggcacttt tattgctaat tgtctataga
     3181 actctttgtg gagacattgt gctaatgtct tctataaagt ctaaatagaa tagaaaatga
     3241 acttactgtg aaatgaaatt tacttttgtg aaattttcaa tatttctgtt caaactttga
     3301 aaagtttaat aaagagagaa ttgcaattga aa
//
