LOCUS       XM_039109054            7086 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus basic proline-rich protein-like
            (LOC120102516), mRNA.
ACCESSION   XM_039109054
VERSION     XM_039109054.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..7086
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7086
                     /gene="LOC120102516"
                     /note="basic proline-rich protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 97% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="GeneID:120102516"
                     /db_xref="RGD:41298329"
     CDS             1..1032
                     /gene="LOC120102516"
                     /codon_start=1
                     /product="basic proline-rich protein-like"
                     /protein_id="XP_038964982.1"
                     /db_xref="GeneID:120102516"
                     /db_xref="RGD:41298329"
                     /translation="MSKARGQSDACCSVDLPNNRRPVSVASRVKPESSITSQCSEGKR
                     RQAPFCFQTNVSWLREHALSGDRPRRGVCSPTATLAKQLEPRGSEVAAGVAASRLPGI
                     SEPLKVSVPGASQLAPSPARPLWSTPRRPHRRGRRPAPPGRGGPRGTRGARGARGTRC
                     GSRAQVAGAGPAWRRQAGSPGPAVTAPRGAATHRLAPRPPPRRRSSPQPRAPRSPIYR
                     LRGSRSGGRLPPSPPASPSARLRAPPLPAGPRGQPLSAAPLPPPPPGRAPPGLARAPD
                     AVERADSCARRFPLPPPPSPAPPLRCGLAARCCHQRAPRAGPLGSPWLSARPQRSVGE
                     ERESAEIGL"
ORIGIN      
        1 atgagcaaag caagggggca gtcagacgcc tgttgcagtg tggacctgcc taataacaga
       61 aggccagttt ctgtagcttc gcgagtgaag ccagaaagca gcattacaag tcagtgttca
      121 gaagggaaaa gaaggcaggc acctttctgc tttcagacaa atgtgtcctg gctccgagag
      181 cacgcgctga gcggcgaccg cccccgcaga ggagtgtgct cgcccacggc cactttagcc
      241 aaacaactgg aacctcgtgg ctcggaagtg gcagcaggag ttgcagcaag ccgcctcccc
      301 ggaatctcag agcccctaaa ggtgtctgtc ccaggcgcca gccagctcgc tccctcgccc
      361 gctcgcccgc tctggtccac gccgaggcgt ccgcaccgca gagggaggcg gccggccccg
      421 cccggaaggg gcggcccgcg ggggacgcgt ggggcgaggg gcgcgcgagg gacacgctgc
      481 ggctcccgcg cccaggtggc aggggcgggg cccgcgtggc gccgccaggc tgggtcgccc
      541 gggccggccg ttaccgcacc gcgtggggcc gccactcacc ggctcgcacc tcggccgcct
      601 ccgcgccgcc gctcctctcc tcagccgcgg gcgccgcgta gccccatcta ccgactcagg
      661 ggctcgcggt cgggcgggcg gctcccgccg tccccgccag cctcgccttc cgcccgtctc
      721 cgggcgccgc cgctgcccgc cggcccgcgc ggccagcctc tctcagccgc tccgctcccg
      781 ccgccgccgc cggggcgcgc tcctcccggc ctcgcgcgtg cgccggacgc ggtagagcgc
      841 gcggactcgt gcgcgcggag gttccccctc ccgcccccgc ccagcccggc cccgcccctc
      901 cgttgtggcc tggccgccag gtgctgccac cagagggccc cgcgggcggg tcccttaggg
      961 tcgccctggc tcagcgcgcg tcctcagcgt tctgtgggag aggaacggga atcggccgag
     1021 atcggcttat agcacaaagg agacgcgaga ctccaggagc ccgcgaccgc cgctcttacg
     1081 cccctgactc ggagttaaaa ggaaccgagc agtgcaactg agctggcaga actacaccaa
     1141 ggcagtgcga gggcttccaa tcccctctct ctgcaagcta tgggctctcg aagatgctgt
     1201 catattctcc ctaaaattga agcaagtacg tgttctttca gtggaacaac gtgtctcctc
     1261 agtagatgta gaaagtgcaa gtaaaacttc tcttgtgacc atcatctggt ggctttctct
     1321 gcgtagtctc tcctagcttc tgagcatctt acacagctcc tccacagact agcgacaaga
     1381 ttcagagatg gacttctgag gtgtaatgca ctgcctcctc tgtgaatgta gcaggcatgg
     1441 aaggaggagg ggaacgctgc ttctatgtct taagagggcc ccagtgagtt ttgtctttag
     1501 cgtcaaccaa gcatcaaaga ttaatttgct ctgccgtgag gatcattaat tttgcaaacc
     1561 aacatgtagg gggactttgt agagtgttaa tttagaaccc tctttcccgg aacagcaaac
     1621 ctgagaaaag gaaattggaa gcaattaaga aaagtggaat gtgcaaagga gcacggagta
     1681 actttgggta ggtattgtgg ccccctgtaa ccaatcctgc ctggtgaaat gagaccgagt
     1741 gggttcagag gccagtggtg aagtaaggca tagacagaag ggtaacatgg tttgacctct
     1801 cgtggtggtg tggactcttc cgggtgtttg tttgtttgtt tttccttttc tagatactcg
     1861 gtggctcctt cccacagcac tctactgaaa acgtttagac agttgccctt ccggttccca
     1921 attcgccaca gacttttcaa gccgatattg tagctgctct gtagaggggt agggtgtgaa
     1981 tgccgtttct ggatctgttg ctccctacat tgtgccttta tttttgccaa ggtctagtgg
     2041 aaaccgtact agcctaccac actctactcg gtccctagga acaggatgaa atcagctgag
     2101 ggagttttga ggaggaagta gagtctctac ctgtcaagtc acaacacgta gacctctagg
     2161 accagcccta gccaacactc ttgtcccctg tgtgtctgca ccagcctgta agagcaggac
     2221 taagtatatt tcatgtacag ttccaaatca tttctctaaa cactgacagc agttatagat
     2281 ggaggctgat cactgtggta gctcatctca ggatcagaga aatgattctg cttcaataac
     2341 tgtctttagt ctcttcctcc ccgggagctc ttgccagtga agttttctgt cagcgtctat
     2401 gttttatcaa acactcttgt accagttata ctatgaacca atacctcttg ttataaataa
     2461 tagcccacct tgtgacattc tgcccttctt ctaaactttc aaagtaggac atgccagagt
     2521 caattgaaaa tgatctgact tgaacattgc ttgccagctc acctttctga gagactgtcg
     2581 ttcctgaaac accacccatc catttcccac acctatgaca aagcttcatt ctagaggaga
     2641 cagttatgac tgaaaatgac attgaacctt tctcttcagt gttctcaatg gcctgacttt
     2701 cctcttcctt caaggttaat ctcaacttta aagtctgaac ggatcataat ttcactaaaa
     2761 cctagctata actcaaccaa aaaaatcaga atttttaaaa atcccaacat ctatggtaag
     2821 cttttatttt tctccctcaa atataaacat gttgagattg gaaagatagc tcagtgatta
     2881 agagcaattc ttgcaatttc ataggattgg attccccagc acccacatgg cagctcacaa
     2941 tcatctgtaa ctccgactcc aggggatctg ggacactttt ctggtcactg agagcaccag
     3001 gaatgcatat gatgttcata cataaaatgt aggcatagta cccataaaat acataaaaat
     3061 aaaaagtttt aagcgtgtta gtaaagcttt atataatgat gttgtctcct ttgaccaaat
     3121 gtgctattac agaaacccag aattttgcta acagcaagag cccccaaatg ttagcaaaaa
     3181 aaagaagaaa aaaaagtcac atcctatttg ctcattttcc aagtgatcca tcacaagaac
     3241 tacagcgttc ttagaggata gctttgtgaa aaattgcagc tgacaagcat cacccagccc
     3301 aagcaaggct ccctccagaa cagtttactt cgacgctttt atctctgcac acaaagctag
     3361 gtcggacacc ccacttccag ccttcttgct aacctttcta attctggcct gtccaatacc
     3421 cgcttacagt ttgccctact ctcggagaaa tgtatgctgc atgccatttt gactatcaga
     3481 atcaccctaa gaacttagca acaagaactt agcaacaatg ggaagaccaa acacgaaata
     3541 ccactggtgc ctgggtccct tcatagacgt agtgacctag ggtacaacct gggtaacggt
     3601 gtttcagggt tctccaggga gttaaactgt gcagcagagg aaggaactgt ggaaatgagt
     3661 catcttcctg ggaatattta cagtctttca tgatactggg gtagctccaa attatctcaa
     3721 gtaatcaaat taaaacacct aatcctgtgc tgtaagactc tttgccaact gactagaata
     3781 gtctcctttc aaaacagctt aaatttatct cctttctaaa gcttccccag attagtctca
     3841 cctggctgcc tggagatctc caggttccca aatctctgag cattccaaca gcattggttt
     3901 acaaagccct ggaccacagt tgactgtgaa taatattgtt ttagccttgc tttcttagat
     3961 agctgtcagg gacgtttctt gtaattttaa tctctctgaa gtctcactgg ccaacagaca
     4021 atccaaaata aacaaatttt attcttagca gaatcttctc cctaactagc tatctaaaga
     4081 acacaatagc ctttaaaaaa ataataatag ccattacaat taaagtcatc agctttaaga
     4141 actaaaatgc ttgttatttt tctttcgtac aaaagaatgt attgtgtatt atgtatgcat
     4201 gtatgtattt atacatagat gtgtgccatt cgtatatctt agacactgga atttggtttc
     4261 tccacccacc tctgtactga aactactctt tgcctcctca ccattgacaa tttcatccat
     4321 atacttgttt atttactcac acatttattg gtggaaagtg ctgggaataa aatattagca
     4381 tcagcagctc ctacctgatg atgcagaaca ctgtgctatt aaaatcccac ataactggtc
     4441 tgtcagacat cttaacagaa gacagcggta ttctatgggc accagggggt ctttgcttag
     4501 gtagcattcg tccagctgac ctctctgcag agtttaaggg gttgctccta ccctgacttt
     4561 ttgagcctct cttttccttc cttcccttca ctgattctgt ataaccagtc aatcctatgt
     4621 ttctggctgt cgtgtctctg agagcttcag gtattgtctt ctcccactcc ttaaacacac
     4681 acgtcctacc gagagcaaag aggatttccg agggaaacgg tagaatggaa agattggaag
     4741 actgcgatgc taggggctgc tgcttgtttc cactccatat tgagatttga gtatctccat
     4801 ctggataaac caatcacggt tccaattaac acgactaaaa taaatttgct acttcttacc
     4861 accctcattt atcccctttc agagtgccct gccctgcatt tcctttgtag cctcccacag
     4921 gctcccctat caggcacaca tttaggctgc cccagtcctc ctaaagccca catgcaagct
     4981 ataggaaagg agtcttttgt ccatctcctc tggctcctaa ttcttccctg ccccaagggc
     5041 tgctttccct aaattaccta tacctaaatt atacctatac ctaaattacc taaattacca
     5101 aggaggtcag tcattttatc cctgtccgtt tactccccac gggacctcac acctaaagcc
     5161 agttgtgatg gtcaaggctc cccatctgca tgttcgtcac tccagccgtg tagctctgta
     5221 tttccggccc gtgcattctg taggcatgcc ttcctctacc tcggctggcc caaatccaga
     5281 cttttccatc cgcctccccc tcctcttctt tgaaatcttt tttgcatcac cataaagagg
     5341 ggaggtaagt gccctccttt gagtttctgc aaaaacatag ttgcctctgt tagtccccct
     5401 tctagtctgt tttataaaag catcaaatta tgtttaaata tttaccttca ctcccccccc
     5461 cattacccag actccaaccc tatcttgctt aaagataaga gtccaggatg ctgtgcatga
     5521 gaaggctctg cagcgtttgc cacaatgctg atatggtagg taaacatcta ttggaactaa
     5581 gttgttaggt ggtggacaac agatgaagac taatgaacag agaagttgct agttgcactt
     5641 gatacttatt cctgaatatg caaggcaccg tagtagagct cttccgagga caatcagact
     5701 taaggtaggg agcctaacaa ggttgcttga gtttaccctg caacagcatg gacatctagt
     5761 taacccttcc ggttctcttt tcaagtgggc ttttatgtcc cactactccc atttataact
     5821 gtataagggg aacataacta tcctcaggta taaagggatt ttttttaact gacatgaaaa
     5881 cggaaattaa aaaccctata agcatcaaca ggcatgtgta tactgttctg acctcattgg
     5941 agaaacctag agacctgaag ccctgtaggg cagaggaggt cctgaagaga agttggacgt
     6001 ggtagacaaa agagtcttaa tagtgacaaa gaggccaagt tcaaggtcac accgtgaagg
     6061 aagctgatgt gctgctcttc cagaggctct gcagggcacc aagggtgaaa gcaggtcttg
     6121 gagaagcaca gtagatattt aaagcatttg tcaaataact gactgatggt cgtcaggatt
     6181 aaatgataga aacaaaggta gaagagtgtg tgtgtgtgtg tgtgtgtgtg cacacgtgca
     6241 cacacacata catgtagtag tgttagtagg atatggccag gacaatctgt tttggctgtt
     6301 caaaagcctg aaagttaatg gtccactata aagagatgca gctactatgg taagaagcac
     6361 agggtgatta gttcctcttt aaaatatcaa ggctgggggt tggggatttg gctcagtggt
     6421 agagcacttg cctagcaagc gcaaggcctg ggttcggtcc ccagctccaa aaaaaaaaaa
     6481 aaaagtaaaa tatcaaggct gtttacaagt gaatctgcca gagacttcac actcgcccaa
     6541 caggcacagt cttatgcttc tcagagcttc cttctgattg ggggtcacat gcctgaatta
     6601 caagcactta ggaagcagga caggaagacc ttttaggttt ttcatcccgc ctcaactacc
     6661 caggcaaact tggattacat ggtgagagct cacatgcaaa acaaaaacaa agcaacaggt
     6721 ggaacgccct gttgacagct cggtgtactt cctgttttac agtgaggagg tgaagaaata
     6781 ggagttaggt tcacctgctg ggttctagcc ccagccagtg tggaaggtgg gaaactcccg
     6841 ctccatctca catcgcttat gcagagtgct ctgtaaatct caggccaact caactgggat
     6901 gaattatagt acaagtcaca cgatgacagg ctctctgtaa catgttattt aattcagctt
     6961 catcatcatg atctgcacac ttatcctgtg cgtgtatttt aaggatgtag aatctgggta
     7021 gagtcacttg gcttttgatg ctgcaacaga agtacatgat accaaagtgc aaatttttct
     7081 aaactg
//
