LOCUS       XM_039108957            1176 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NEDD4-binding protein 1-like
            (LOC120102462), mRNA.
ACCESSION   XM_039108957
VERSION     XM_039108957.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108957.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 39% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1176
                     /gene="LOC120102462"
                     /note="NEDD4-binding protein 1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 30% coverage of the annotated genomic feature
                     by RNAseq alignments"
                     /db_xref="GeneID:120102462"
                     /db_xref="RGD:41096301"
     CDS             1..1152
                     /gene="LOC120102462"
                     /codon_start=1
                     /product="NEDD4-binding protein 1-like"
                     /protein_id="XP_038964885.1"
                     /db_xref="GeneID:120102462"
                     /db_xref="RGD:41096301"
                     /translation="MENSSADPSHTSVKIGEYQKIVEKALTLLIACVISGISLYQFTV
                     AIFIYFLLEELKNTHLQLEILSKKVAKLAGQQQEIGVLGGKLDTILERLERPTAEEAR
                     EQEVLNCEPVVPDKIEAEDRQPIEHKAPPLTDLTEAGSPSALSFPAAREQRPENGLQE
                     QTGITGPNNRKPDCAEPPRSCSSPHLKPKTPQTDPALLPQHLTSHTDARLARPCDQIY
                     SSITRDQRFQDILKTPYQLDLRNEPAREDLKPIVIDGSNVAMAHGLNKFLLHLAEKTG
                     GIIVTNDNLREFVTESVSWREIIARRLLQYTFVGDIFMVPDDPLGRHGPRLEEFLRRE
                     AFLLHTPPKLDAQSDVRTFGHAIQSHNSQGAQASPGAPPRTRLLQRKAL"
ORIGIN      
        1 atggaaaatt ccagtgctga tccctcacac acaagtgtaa agattggaga gtaccagaag
       61 atagttgaga aagccttgac tttactgatt gcatgtgtga tttcgggcat aagcctctac
      121 caatttacag ttgcaatctt catatatttc ctcttagaag aactgaaaaa tacacatcta
      181 caactagaaa ttctctcaaa aaaggttgca aagctagccg ggcaacaaca agaaataggt
      241 gtgctaggag gaaaactaga cacgatatta gaaaggcttg aaagaccaac ggcagaggaa
      301 gcaagagaac aggaagtgct taattgtgaa cctgtggtgc ctgataaaat cgaggctgaa
      361 gacagacagc ccattgaaca taaagcaccc cctcttacgg accttactga ggcaggttca
      421 ccatctgcac tatctttccc agcggcccgg gaacagaggc ctgaaaatgg tttgcaagag
      481 caaacaggaa ttacaggtcc taataatagg aagccggact gtgcagagcc tcctcgctct
      541 tgcagctctc ctcacctcaa gccaaagact ccccaaaccg acccagctct gctgccccag
      601 cacttaactt cacatactga tgcaagattg gcccgaccct gcgatcaaat ctattcctcc
      661 attacccggg atcaaagatt tcaagatatt ctgaaaacac cataccagct ggacttaaga
      721 aatgaaccag ccagagaaga tctgaagcct attgttatag atggcagtaa tgttgcaatg
      781 gcccatggtc tgaacaagtt cctgctccac ttagcagaaa agactggtgg catcattgta
      841 accaatgaca acttgagaga gtttgtgacc gagtccgtgt cctggagaga aattatcgca
      901 agaaggctgc ttcagtacac ttttgtgggg gacatattta tggttcctga cgaccctctg
      961 ggaagacatg gacctcggct cgaagaattt cttcgaaggg aggcctttct tctacacacg
     1021 cctccaaaac tcgatgccca gtcagatgtg cgcacatttg gccacgccat ccagagccac
     1081 aatagccagg gagcccaagc aagccctggt gctccaccca ggaccaggct tctgcagaga
     1141 aaagcgctct gagggtggcc tttgtgaatg gccttc
//
