LOCUS       XM_039108952            2540 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus calcineurin B homologous protein
            1-like (LOC120102456), partial mRNA.
ACCESSION   XM_039108952
VERSION     XM_039108952.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108952.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..2540
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..2540
                     /gene="LOC120102456"
                     /note="calcineurin B homologous protein 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 ESTs, 6 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120102456"
                     /db_xref="RGD:41090173"
     CDS             <1..744
                     /gene="LOC120102456"
                     /codon_start=1
                     /product="calcineurin B homologous protein 1-like"
                     /protein_id="XP_038964880.1"
                     /db_xref="GeneID:120102456"
                     /db_xref="RGD:41090173"
                     /translation="CVGFPSPGRRGFPPRAAGETVPSPFLTPGPSLPYSLLPPLRLAL
                     PLPEELPSLGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSRED
                     FQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPL
                     NSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQD
                     GDSAISFTEFVKVLEKVDVEQKMSIRFLH"
ORIGIN      
        1 tgtgtcgggt ttccctcccc gggccgcagg ggtttccctc cccgggccgc aggagaaaca
       61 gtgccctctc ccttcttgac ccccggccct tccctccctt attccctctt gccgccgctg
      121 cgtctggcgc tgccactccc ggaggagctc ccgtcactgg ggtctcgggc ctccacgtta
      181 ctgcgggacg aagagctcga ggagatcaag aaggagactg gcttttccca cagtcagatc
      241 acacgcctgt acagccgctt caccagcctg gacaaagggg agaacggaac tctcagccgg
      301 gaagatttcc agaggattcc agaacttgcc atcaacccac tgggggaccg gatcatcaat
      361 gccttcttct cagagggaga ggatcaggta aacttccgag gattcatgag aactttggct
      421 catttccgac ccattgagga taacgaaaag agcaaagatg tgaatggacc ggaacccctc
      481 aacagccgga gcaacaaact gcactttgct ttcagacttt atgacttgga taaagatgac
      541 aagatctccc gcgatgagct gttacaggta ctgcgaatga tggtcggagt gaatatctca
      601 gatgagcagc tgggcagtat tgcagacagg accatccagg aggctgacca agatggagac
      661 agtgccatat cttttacaga atttgttaag gttttggaga aggtggatgt agaacagaag
      721 atgagcatcc gatttcttca ctaaagggca gagaccaaat tattcttgct ttctagtatt
      781 taagaactga aacttccttc tgtcctccag ccccacccca tcctgtcatc cccctttcca
      841 gaatactaca gctcctgcat gacaacctga agtctctcct gtccatacaa acttgccttt
      901 ggtgtataaa cagggcgtta cagaatggta ccctgtctat ttctgttcgg tatccaccca
      961 tcagtcttta ttgtaagtac caacttcccc tgttctactg ttcagtgcca cgcatccgtc
     1021 ctgtctgagg aaagaaacag ggactcatgt caagaaccag ccagcaaagc tcccactaga
     1081 tgggaccata tccatgctgc cttcccttca tcagccctcc atcatggtcc tgtgtgctgt
     1141 gtcctgtgtc ctgtgtctgt ttcttcctac ctctctgtca tccagccttc tctccattca
     1201 gtctttcagc tgtcctcctg tcgttgagat tccctgcatt ctacttgact ctgggctctg
     1261 ctggtaagcc tgtttctgat gtggcaggat agttagtggt ctggtgatct gtatctacct
     1321 tctgatgtgg gatattgcct atgcaggagc tattgctctg tcgtcacagg gcttatgagc
     1381 agacatgttc ttaaaaggta gtcatggtga ggcttgtaga gccatgtctc ctaggtggct
     1441 tcccaggtct ctctacctct gactttttat tttcaaatat atttatgtgg cttttctggg
     1501 tacagtgttg acattcagaa aatagtctaa tgcctgccag tttgcttctc tttgggacat
     1561 tgtcaccacc taagcggctg ttctgacaat atggtagagg gccttcttgt gttttttgac
     1621 aaggatgggc accctggaga gctgcccaca tttgctccac agcatgggtt atgcctcagt
     1681 gttctgtaca cttgaagatt cttcacattt ccaaacagaa agactagtgt tacagaagtg
     1741 cctgacttac ttcagtccta aagaattaga ttgtcctcag tgtcttaaag ttttgcacaa
     1801 aactctgaat gaattttata cttggcaaat tttaatgctg gaagatgtat agtcagttca
     1861 taatcctggt ccaggcactg tatgcattga atgtattgtc tcatgagctt cctaatgaca
     1921 cgaccttcct agctccttgt gaatactata ctatgcagat cccttagaag catgggacct
     1981 gggactggtg gcaccaactg aggtgacatt ctctgccaat gtcagcttga tttagatgtc
     2041 actgaatcaa gctgcttccg ccctgtgttc ctgtgaatct gctcttggct ggctttctct
     2101 ggtgttgcct gcttgcttgc ttgctttgtt gctttggaag gctatccaag atatgtaagc
     2161 aattctttag gaaataaatt gctgttaacc caaacaaaca aaaacactgc agacgagatg
     2221 ggtaaaggtg agcagtgggg gcgtggctag gacagatggc tagggtctac atgaactggg
     2281 gaattcttta tgaaatatgt cagactttgt gatcaaatga tgtgatataa gaattgtata
     2341 aagggaataa ttgtctgata cttatctgtt tgagaagtac ttcagaagca tcttgattta
     2401 attatttaaa gtttctaaga ttatgccccc cttggctgta tagcaaactg tttttatcca
     2461 cagttgtgcc ttattgtccc attaaaattg tattcctcaa tccaccaata aattaattgt
     2521 cattaaaaca aaaaaaaaaa
//
