LOCUS       XM_039108949             585 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L17-like
            (LOC120102453), mRNA.
ACCESSION   XM_039108949
VERSION     XM_039108949.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..585
                     /gene="LOC120102453"
                     /note="60S ribosomal protein L17-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 56 Proteins, and 78% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120102453"
                     /db_xref="RGD:41322533"
     CDS             16..585
                     /gene="LOC120102453"
                     /codon_start=1
                     /product="60S ribosomal protein L17-like"
                     /protein_id="XP_038964877.1"
                     /db_xref="GeneID:120102453"
                     /db_xref="RGD:41322533"
                     /translation="MVRYSLDPENPTKSCKSRGSNLRVHFKNTQETAQAIKGMHIRKA
                     TKYLKDVTLKKQCVPFRQYNGGVGRCAQAKQWGWTQGRWPKKSAEFFLHMLKNAESNA
                     ELKGLDVDSLVIEHIQVNKAPTMRRRTYRAHGWINPYMSSICHIKMMLTEKEQIVPKP
                     EEKVAPKKKVSQKKLKKQKLMAREKIQHK"
ORIGIN      
        1 aggggacctg tgaagatggt tcgctactcc ctagacccag aaaaccccac gaaatcatgc
       61 aagtcaagag gctcaaacct tcgagttcac tttaagaaca cccaggaaac tgcccaggcc
      121 atcaagggta tgcatatccg caaagccacc aagtatctga aggatgtcac tttaaagaag
      181 cagtgtgtgc cattccggca gtataatggt ggagttggta ggtgcgccca ggccaaacag
      241 tggggttgga cacagggacg gtggccaaaa aagagtgctg aatttttcct gcacatgctt
      301 aaaaatgcag agagtaatgc tgaacttaag ggtttggatg tagattctct ggtcattgaa
      361 cacatccagg tgaacaaggc tcctacgatg cgcagacgaa cctacagagc tcacggctgg
      421 attaacccat acatgagctc catctgccac atcaagatga tgctcactga gaaggaacag
      481 attgttccaa agccagaaga gaaggttgca ccgaagaaaa aggtatccca gaagaaactg
      541 aagaaacaaa agctcatggc acgggaaaaa attcagcata aataa
//
