LOCUS       XM_039108839            2316 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus sentrin-specific protease 2-like
            (LOC120102398), mRNA.
ACCESSION   XM_039108839
VERSION     XM_039108839.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108839.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2316
                     /gene="LOC120102398"
                     /note="sentrin-specific protease 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 10 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120102398"
                     /db_xref="RGD:41318674"
     CDS             493..1917
                     /gene="LOC120102398"
                     /codon_start=1
                     /product="sentrin-specific protease 2-like"
                     /protein_id="XP_038964767.1"
                     /db_xref="GeneID:120102398"
                     /db_xref="RGD:41318674"
                     /translation="MWQPKKPGVGMKPEASEQRRKRKHLDQNGTETESEALGPEPSRN
                     CQDGTQMVFQKPGKARKKTRQEHQDQKLNKEQPGKGQGQKTQEEGSGNIKPLEGLPDQ
                     AVVEKSAEGGKCRKRPYSVLQEKPQSPQNEKHARSLEHLQGGHPVRSDPHRPHPTFSD
                     TSNNKGGMPGHPHGRETAQGDGQSSTEVLSTKREKRCAEEKCVRGNSLEHGLPGTANA
                     NILDSGGSRFPNKVAVVAGEEKALPEQENNQEKEFTKEMEKEVEKALGPGAQEEILST
                     GFKLKITRGDMQTLKNGQWLNDEVINFYMNLLVQRNENQGYPALHAFSTFFYPKLKQG
                     GYNSVKRWTRGINLFEKELILVPIHQRVHWSLVVIDLRKRSIVYLDSMGQTGKNICET
                     IFHYLQNESKTRRNMELDPVEWKQYSLTSQEIPQQLNGSDCGMFTCKYADYISRDQPV
                     TFSQQHMPLFRKRMVWEILHSHLL"
ORIGIN      
        1 tcctctaatt gaccatgatg gggcagtttc ctaaaagaca aatgtactcg tcaggaccag
       61 ttaaattatg ctgaggtgat ttggggaact ctgctctgcc aaagtgaact gagctatata
      121 ttattcattc aaacttccca ctcgggcaag ggagtgcttt aaaatcctgg acctagttgg
      181 ggtaggggag agcttcaacc ctccaaagaa cgttggtttg ccttctttca ggtgacatca
      241 caaccagcta tggaaccttg aaggctgtga ttaggggcaa ccccctgatt taggtatcac
      301 tcgtgaggtt gcctccgaag tggtagctgc taggtttaga cctggtgcgt tactagtgat
      361 tttaatagga cgatcagtct catttgaaag ttttttggat ttagctgccc acccagagcc
      421 tggcatacgg ttgcttttcc cttctacatc ataaagccgg caccctcaaa acacctagcc
      481 aaaccggtct ccatgtggca acctaaaaag cccggggtgg gcatgaaacc cgaagcttca
      541 gaacaacgtc gaaagcggaa acacctcgac caaaatggga cagagacaga gtctgaagct
      601 ttgggaccag aaccatcaag gaactgccaa gatggaaccc aaatggtgtt tcagaagcct
      661 ggaaaggctc ggaagaagac ccgtcaggag catcaagacc aaaaacttaa taaagaacag
      721 cctggcaagg gtcagggaca gaaaacccag gaagagggtt caggaaatat caaaccccta
      781 gagggtctgc cagatcaggc tgtagttgag aagtcggctg agggtggcaa gtgtcgcaag
      841 cggccatatt ctgtcctaca ggaaaaacct caaagccccc aaaacgaaaa gcatgctagg
      901 tcactcgaac atcttcaagg tggccatcct gtgaggtctg acccacacag gcctcaccca
      961 accttttctg acacctccaa caacaaaggt ggaatgccag ggcatcctca tggacgagaa
     1021 acagctcagg gagatggaca gtcatcgaca gaggttctct ctaccaagag agagaagagg
     1081 tgtgctgagg agaaatgtgt acgggggaac agcttggagc atggcttgcc aggaacagcg
     1141 aatgcaaaca tcctggacag tggcggcagt aggttcccca acaaggtggc agtagttgca
     1201 ggagaggaaa aggctctccc agagcaagaa aacaaccaag aaaaagaatt tacaaaagaa
     1261 atggaaaagg aagttgagaa agcattgggt ccaggagccc aggaagaaat cctcagtaca
     1321 ggattcaagc tcaaaatcac ccgaggagat atgcagaccc tcaagaacgg tcagtggctc
     1381 aatgatgagg tcatcaattt ctacatgaat cttctggttc agagaaatga aaaccaaggc
     1441 taccctgctc ttcatgcctt tagcactttc ttttacccca agctaaaaca aggcggttac
     1501 aattctgtga aaagatggac ccgaggaatc aatctctttg aaaaagaact tatcttggtg
     1561 cctattcacc agagggtcca ttggagcctg gtggtaatcg atttaagaaa gcgaagcatt
     1621 gtctacctcg attcaatggg tcagacaggg aaaaatatct gtgagaccat cttccactat
     1681 ttacaaaatg agagcaagac ccgaaggaac atggagctgg accctgtgga gtggaagcag
     1741 tacagcttaa cttcacagga gatccctcaa caactgaatg ggagcgactg tgggatgttc
     1801 acctgcaaat atgcagatta catctctaga gaccaacctg tgaccttttc tcagcaacac
     1861 atgcccctct tcaggaagag gatggtgtgg gaaatcctgc acagtcactt actgtaacag
     1921 catccacctg gttgctatgg ctcccgccct gtctgtttcc atccatgttt ctaatatacc
     1981 tcaagtggga tgagttgaag agactttaaa cagatactga gctgtctgac cggatggagc
     2041 ccactctctt caatattgtc ctaacgtgag gtgtgggtct gccgccctaa tgccatctct
     2101 agaacgtata taactaccgc cagcttagaa actgccactg tccaactcat gcaagactac
     2161 ctgctcaaga aatactattt taatgctgaa tttagtcaat gaattggggt ttttggggtt
     2221 ttttgtttgt ttgtttcttt gtgtatttta tttttctttg ttttttgttt tgttttcgtt
     2281 tgcgtttttg ttttctttgt tttgtttttg tgtgtt
//
