LOCUS       XM_039108783            1009 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized protein C9orf85
            homolog (LOC120102370), mRNA.
ACCESSION   XM_039108783
VERSION     XM_039108783.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108783.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1009
                     /gene="LOC120102370"
                     /note="uncharacterized protein C9orf85 homolog; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120102370"
                     /db_xref="RGD:41392789"
     CDS             136..360
                     /gene="LOC120102370"
                     /codon_start=1
                     /product="uncharacterized protein C9orf85 homolog"
                     /protein_id="XP_038964711.1"
                     /db_xref="GeneID:120102370"
                     /db_xref="RGD:41392789"
                     /translation="MSYQKGSRAHFRPQAPDHITFKTRKFDSVQSKKINSRLHDRECQ
                     HCKVLEWCVQFNKYKPLSSLGSGLNVYKRQ"
ORIGIN      
        1 ggcaactact tacttacaag actaagaaca catcattctg gactgtcagt ggtctctcaa
       61 cctggggcag gaagctcttc actcatcccc tacaacttaa atgctgcgcc aggttaaggt
      121 gcttgtgatt tggtgatgag ttaccagaag ggcagcaggg ctcactttag gcctcaggca
      181 ccagatcaca tcaccttcaa aactcgcaag tttgatagtg ttcagagcaa gaaaattaat
      241 tcacgactcc atgatagaga atgtcagcac tgcaaagttc ttgaatggtg tgtgcaattc
      301 aacaaataca agccactgtc aagcctggga agtgggctaa atgtttacaa aagacagtga
      361 tggactctta ccacacaatg tgtgcctgtg aacctgaagt gtttgtaaaa tgtgaaaaga
      421 aagaacatat tgctatcctg ttgaatgatg aaatggaaaa tactgaaaat tgccaaggtt
      481 ctaactatag acgaagctag agagggaagg aaggtcgggg attagctgct gagacatact
      541 gcacatactg tcccatgttg gaaaatccat ggaaattgtt cagaggacca tattacctaa
      601 tgccaagcta aacaatggtg agacttggtg atcttattgg aattgtctca tggaaaacct
      661 aaactctctg tgggtccatt ttagaagacc aaccttgggt acgtgacccc ttcatcaaag
      721 gcccctgcac accttacaag caaaacccag ttatacacat acacacataa aaatcacctg
      781 gaatgattct ccttcaacaa tatttttcca tatgtcatcc tattgtttat gccctttcca
      841 gtttgaaaat acacactcag aaaaaaaagt gtgggccatg taacaatata gaaaggaaaa
      901 tctgagcctc acgctcgaat ggagctattg ccaatatcag atgcttccga ggttctccgt
      961 cataagctca tcctgcccag agtgccatcg tcctgaacta tcgctttac
//
