LOCUS       XM_039108779            8249 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus translation initiation factor
            IF-2-like (LOC120102363), mRNA.
ACCESSION   XM_039108779
VERSION     XM_039108779.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8249
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8249
                     /gene="LOC120102363"
                     /note="translation initiation factor IF-2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 7 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:120102363"
                     /db_xref="RGD:40962142"
     CDS             1770..2423
                     /gene="LOC120102363"
                     /codon_start=1
                     /product="translation initiation factor IF-2-like"
                     /protein_id="XP_038964707.1"
                     /db_xref="GeneID:120102363"
                     /db_xref="RGD:40962142"
                     /translation="MACQFSPPKELKRSLGRLARAAPSPLALPPGPGPYSPATSSPGS
                     LPGAPAGAPTPRGEAGEERRAEKGKPELRDAKVAAPAPASHALARLPRLPALTPATPG
                     PAGAPASQFRKHPRVSRAFGSSGLGTRCRRDNGERGLLEAAQGQRRRDRGGKGCGSGG
                     GSSDGDGVRQGKFGPVALHRRTFATVPRRSIEELASSLWVWKRSLDTSQGTAGASMF"
ORIGIN      
        1 acatctagaa tacacagatc aattagcaca ggcctgacag tttccagctc ccacactata
       61 cagtggactc tcttcagtct tccttctcac aaggtctcca tgtcctggcc agcatctctt
      121 tagagcatct ctaggtgcca gcttctttat aaaggtcctg gtccgggtgc ttgacctatt
      181 gctgcctatg tctcaattcc tttagcttag tctcacataa agtgacaaga gtgatctttc
      241 taaatagcaa tgatcatacc aattatgtga ctaaaagcct ctagctgctc tccagcttct
      301 tagggtaata ttcagaccat ctaatataac attcaaggaa tttcttttgc tctctggccc
      361 tagtcttcct ttctagattt tttttcagta gttatggttg tctacacaca gcaacataca
      421 attccctgcg tgttataatc tctcaaggta caaagggctc tctattagga atgctgattg
      481 gtaggatcct acaaattctt caaaacctag ttcaaatgac acttttatta tgatttcttt
      541 cactctcatg gaaaagctgt ttccatggca ttctattctc acctccagtg tgacattttc
      601 tggttttgtc ttctcccatt ttactaagat cttcagtaga taccagaact acctacttct
      661 aaatcctccg ctcctagtat gcaatggact ctcaagcctg ggcaaatagt atgaaacctg
      721 ttgaatgaat agctgagtga gaagaccacc agattaggag ctgaagaaaa tgagattaag
      781 aattaaaagt tgcctatgtg taagcctgag tgagtggtca atgaccgagt cctagagtcc
      841 aacagaaacc aatggacttc gtaatcagtg cattgctgaa gactttatgg ggatcctcac
      901 cttggaactg agtgggaaga catagggaga aaccatgtga aaatggtcat ttacacaggg
      961 aaaacatcac aagctgcact tgatttcctc atttacagat tcatgcaaca ttaactcagg
     1021 gactacagag tgccaggccc taagggcaca aacatgaaca aaaatctagg cattatgttc
     1081 caaggttctc aagggctaac cctcccccat cgcagtgttt ctgggagagt agagacagca
     1141 gatggcacta aaccccaggg agcccagctt agcctggtac tggcctaatt tctctcagga
     1201 ctagttgctt gggaccacca atgcagggcc tacctaacct ccctgacaaa cactgactct
     1261 cagccttctt tctcctgagt cttaaccacg agaatgggca gctctcgtcc atctatcggc
     1321 aacaactcaa gccaagctac acattcaact ccaactcact tctatttcct acctgctgct
     1381 gtgcctttaa acacaaaacc aattataggt gcaaacaagc tcaactcttt ccaagccggg
     1441 tccctggtga acgctgtcgt tctggctttg ctgccctggt tcccgaacta gcacagtgcc
     1501 ccaagggacc tggcgtcaga ggtactgagc tctgaaagcc ctggggccct agggtatggc
     1561 ggaagcatct actcccggga actccaggag ctgaagaaag tatgaggaag ggggtgggac
     1621 aaggcccgcg gggctagagc ccagtctccc ggatgctgca ccactttcct tttgtcaaag
     1681 tgtaacaagt caaacaaggt ttcccttcag ccactggccc aggcagcttc aaagggaaca
     1741 ctgttgccgc ggacgctccc cacgaaccaa tggcctgtca attctccccg cccaaggagc
     1801 tcaagaggag cctagggcgc ctcgccaggg ctgccccttc tccactggca ctacctcccg
     1861 gacccggccc gtactcaccg gccacctcca gtccgggctc attgccgggg gcgcccgccg
     1921 gggctccgac cccgcgtggg gaggccggcg aggaaagacg ggccgagaag gggaaacccg
     1981 aactccgaga cgcgaaggtg gccgccccgg ctcctgcctc gcacgctctg gcccggctcc
     2041 cccggcttcc cgcgctgacc cctgccactc ctggtcccgc cggtgcccca gcgtcgcaat
     2101 tccgcaagca ccctcgcgtt tcccgagctt ttggatcttc tggcctggga acccggtgcc
     2161 gccgggacaa tggggagagg gggctcctgg aggcggcaca gggacagcgg cggcgagacc
     2221 gtggcggcaa aggctgtggc agcggcggcg gcagcagcga cggcgacggc gtccgccagg
     2281 gtaaatttgg tcccgtggcg ctgcatagac gcactttcgc cacggttccc cgccggtcta
     2341 ttgaggagct tgcgagcagc ctgtgggtct ggaaaagatc tcttgatacc tcacagggca
     2401 cagcgggcgc ttccatgttc taacgggagt ttctggagac cgaaatcgca gtatgggaga
     2461 gccggggtcc tcgggccgtt tgtggcgaat ctgcgactac ggacaggcag cgcgaggctg
     2521 ggtgtgagga gcccgccctt ctcccctccc cctctgccgc ctcctgctcc ctccctcctg
     2581 ctggcgcggc tgctgcggta gggacctggc cttggtctcc gaggaaggcg actgggaggg
     2641 acggggcggg agcgcagggc ggggcggagc tgggggcagg gcccagagct atggggaggc
     2701 aagggagccg caggggcctg cagttatggt cagaggcggg gcaacgtgag aagaatagcc
     2761 cagcgtggga ggggcttgtg tttgggaggc ggagccgccg gaaagcggcg cactaatgcg
     2821 acgaccacag ccggaagagt gggcctgagg gtcccaagta acaaagggcg gagctgtggg
     2881 taaacctgga aggtggagct aaactaggga tgaagataca gctgggaaag ggcaccacag
     2941 tgcagcaggg taagggcggg acttaggaaa ataaggggcg ggtttcagct gaaatctgag
     3001 acggaaggga gacgaggcgg agggaaggcg tggccctagg ttcggggtac atccctacaa
     3061 aaccgtggaa ctcagattgg cagcgctgga ctactttgtt accggtggct gattggaaga
     3121 cggtgtcaaa acacacagct cattgaatat gactgacact tcaagtgtga acgtgggaaa
     3181 attgctgaat tcttctttgg gttcctcatt tgtaaacctg gagcttgaaa attgtgtcat
     3241 ttggtgggga ttttaaagaa tttggatcat cattgtcaag cagggtttgc agtttgtcat
     3301 tgaagagtat gataaaatct ttcaagatgc tatagtcact gaaaaacttg ttttgttttc
     3361 acgcagactt ggttttcagc accctaaagt gcacgttttc ctaggacagt tttccctgga
     3421 gaaatgccaa taaaaccagc actccaagaa gttgtttccc cgttaaacag tggggtctgt
     3481 cgtaaaatcg gtgatttctc ttaaagaaat ggcttattgt aactgagttc cccgttatta
     3541 aatggagata atatatagtc cttctgtccc agggatatgg taaagattaa gagagatgag
     3601 gtctgtaaat tgtctaacac agtgtctgtt gtgtaagatt cgcatgcaca gagaaaatat
     3661 agctattata ctcacccaaa aaattcagaa taagccaata atctcagcac tcaagaggac
     3721 tgagttagga ttgcctggac tacctgtgag tgccaggtca ggatgagtga cacagcaaga
     3781 ccctatctaa acaaaaaaac aaaataaatg aattgaagaa gttatacaga tttgcttttt
     3841 ccattactga gactgaagag aaggctttgc acatacaagg ccagggatct atcacaacag
     3901 ccttttcttt tttatcaaaa aaaaaaactt ttttaaagtc cagataaatt gcctacactg
     3961 gccttgaact tgtgattaca ggcttttacc actagtatca cacagttgtc ttaaaactag
     4021 cgtttttgat gtgaagaact gcttagaaaa tttgatgaaa gctatgagtc tgtcctgagg
     4081 aaaaaatgta caagtatgca taataatttt ttaaaagtat ttggaatttg atatagaagt
     4141 gactaggtga gtatagtagg atggatgcta atgtaactga agttatcctt gctcctccct
     4201 cttgatgtgg ccccaggctc tgcgtcccca gtctccctct ccaacaccca cgagacagat
     4261 tgagaagatc agctttatta ttggcatagg aagggctacc tgaacgatgt cccgctctgc
     4321 atagcgtccc cgggaggaca cacgcacatc atcaccatcc agttcttcca ttgctgcaga
     4381 aaagacaagc gggcatcatt ggatgggtct ctccaactcc agctcattcc gccccttcct
     4441 cattagagcc cttcagagtc ctcacaagga gacctgattt gcattctaca gtggtgtgag
     4501 attgctatta ttatctctat gcttccttcc tgtatgtccc attctcctag aaatgcaggg
     4561 gaaatatcga caccattacc agagttatgg aggggaaaca tgtttgactt caccaaggag
     4621 ccagtctgtt ttgtctttga ggagggccca agtggctaga tccttcctgt cccctccagt
     4681 tcctagtccc agtgatggac acaccccttc ctactcaccc tcaaacatgg caggtccaac
     4741 acccacaata atgatagaca tgggcagcga ggacgcctgt ggggagagga atggcttgag
     4801 taagcagctg taacacacag tgcctgcggc gtctgtgtgg atcacatgct cctgttagcc
     4861 aagataagct gctgtgattg gttgtggact atctctggat gcacaacagg tgccttctgg
     4921 tggaacataa agccattatc ttgtccgttt gagacaaaag tctcactcta gcacaggctg
     4981 acctcgatat ttctagtatc attttaaaaa ggttttcctg ccagacatgt caatatgcat
     5041 ctgtcatact agtactcatg aggctgaggc agggagataa ccacaagttc tagaccaatg
     5101 ctggttaaag catgtgttct agggcagtct gagtacagtg taagactcca tctgaaaaac
     5161 aacagcaaca aaactatggg aaccttaatg acagcaaaat acccatacga ggcacggcac
     5221 atcattcaca cacttccagg actcaggagg cagaggcagg aggatcaaag ggagttcaag
     5281 agtagcctgg tgtggggctg gggatttagc tcagtggtag agcgcttacc taggaagcgc
     5341 aaggccctgg gttcgatccc cagctccgaa aaaaaagaac caaaaaaaaa aaaaaaaaaa
     5401 aaaaaagagt agcctggtgt atatagcttt tcccaggcca acaaaccaac aaacaaaaat
     5461 agccagtcct ggtggctcat gcctatagac ccagcacttg ggaagctgag gcagaaagat
     5521 tgcctctgct caggccagtc tgggccatat agggatccag tacacagtca gaccgtgtta
     5581 caaaacaaaa caaaacaaaa ttaaaagcaa ataaaaaata actccccctc tcctgacaaa
     5641 ggacaggcat gcttcctgct gaatataaaa gaccagcttt cctaagctcg ggttccatag
     5701 tgggctcatc tggcaccatg ctgggaccta gagaatcaaa agccagtgtt gtttgtgtcc
     5761 cagccaataa gcatttctga aactggcaga tgagattgtt aggatacaca tggaacacgg
     5821 aataaacatc atagccccct cattgcaagg acaatgaccc ctccctgaca agccttcctc
     5881 ctcaaactca cactgacgat ggcctctttg gtctgtgtca tgtcagagat gacgccatca
     5941 gtgataatga gcagaacgta gtactgggaa ccatccgaga ttttggctgc agccctgcat
     6001 gaaagaccaa gttctgtatg cagtggccag ccagaaagta catggtcagt tcagcccctg
     6061 cttctacagc caccatataa gcaagcagtg ggcaagacct tgggctcctg tatcccacag
     6121 tctttggcag acctgcttgc tgcccttagg tgccatctct ccattctata tatagttttt
     6181 ttttcttttc tttttttttt ttccggagct ggggaccgaa cccagggcct tgggcttgct
     6241 aggcaagcac tctaccactg agctaaatcc ccaacccctc tatatataat tttaaataag
     6301 gtctctcata acagaagtag acagtgacta atcctcctgc ctgctcccac ctcccgtgtg
     6361 ggatcacagc aatgatctac caagtccgtc tcctctcttc atccatctct aaatgcagga
     6421 gttttctctc agaaaaggac ttcagacatc cctaggtctc ccccatctgc caacttcagt
     6481 tacacatcct gagtggactg gcaatgattg atctgtgttg tccaatacat tgtccttagc
     6541 cacatgcgaa tggatataga gatttaaatc aactaagatt aagtgattaa aacattccat
     6601 tcgctagtca ctctaattac cttttaaggg ttctctcccc atatgtgatg gtgaacacca
     6661 tactagagag catagaggcg gacacttctc tcattgcagg acattttgtt agacagtgct
     6721 ggcagctaaa cttggtctct gaaggctgag aaagcatggt gacagtgtag ttgccttggc
     6781 ctcttggttg ctgggatgta cagcacctaa cccagcttat cctattttta aagtgaggaa
     6841 actgaagttc acaaacacta ggcagcagtc cccaagggca aagaaactga ggtccatcag
     6901 tgtccgccct ggcctgctcc tgcacagtcc tccatgtgcc gcacctgttc ctgctaggtc
     6961 tagccagcca gcatctctca aacctgtcac tcatgcctct gtgcttttaa tgtgcaatca
     7021 gcactgccag gcttactagc cctctcctaa tgaaggccaa ctcaccatgt agaccaagct
     7081 taacagcccc tctactgtag cctgtgccct accattcagt atgcagcccc attcactgag
     7141 atcctcatac cccgagggtt ccaaggatga attgtcctat gtgtggatga agccagggga
     7201 tccagtacac acaatgctcc ttcttaacat aattagagca gacacagaca ggatgggcaa
     7261 agactagaaa gtttgcatgt gtttgtgaga tgaaacacta gacttcaaag tccctctcag
     7321 tctgactgct ttcagccgtg tcctccatct ccccctaacc cccatcccca gggaatgcag
     7381 tgtcttactt ttgccaccag gcaacttgct agaaatttct ggggagcttt ggcctacaga
     7441 agtgatgatt tatttatatt tctgtctcct gcaccaaggc aggagctccg gagggcaagg
     7501 actaaatttg attcatctgt gagtccccag tgccccagca gagaactgag cacacagcag
     7561 ctgccctttg aatagtgata atgataataa taggaacagt aataactact gttacagcac
     7621 ttaccagggg caagcactct tgtgagtgct tgacatatgc taacgggtcc ttgtaacagc
     7681 cctgtagtgt aaatattcct ggcattctca atctcatttg acagagttct taagagaatt
     7741 gaccaaagcc acaaagccag cctgtgacaa tgtctgacca atgtacaggg tctaatagct
     7801 caataggtag cttgcctagc acacatagac tgggggtttg atccccagca ccacagacat
     7861 tgagtagagt gatgcacacc tgtaatccca acactgggaa ggtagggaag caaaggcagg
     7921 gggatgggaa ggtctacatt atcctcggct acaatgccga cctggaatac atgagacggc
     7981 gttgggggtg gtgggtaggg gtaggatatg gcactgatgt actgctaatt tactctactc
     8041 cagaatctac acttctgata gaattgtctt aaactgaatg tttattaaat aaatgagtaa
     8101 ataaatcagt gtagttgctc aggatgtcta agaagactgc ttaataacaa taaccaggat
     8161 tctaggatta gaatgacaaa agttgtgatg ccacatgttc cagcttttct ttttcctttt
     8221 tttttttttt tgtttgtttt gagagatgg
//
