LOCUS       XM_039106742            4687 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 431-like
            (LOC120101823), transcript variant X1, mRNA.
ACCESSION   XM_039106742
VERSION     XM_039106742.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106742.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4687
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4687
                     /gene="LOC120101823"
                     /note="zinc finger protein 431-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     Proteins, and 95% coverage of the annotated genomic
                     feature by RNAseq alignments, including 11 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:120101823"
                     /db_xref="RGD:41211592"
     CDS             65..1585
                     /gene="LOC120101823"
                     /codon_start=1
                     /product="zinc finger protein 431-like isoform X1"
                     /protein_id="XP_038962670.1"
                     /db_xref="GeneID:120101823"
                     /db_xref="RGD:41211592"
                     /translation="MDVLTYDDVHVNFTEDEWALLNPSQKSLYQGVMLETCRNLSAIG
                     YIWEDNTTEEYCKRSGRHGRYERSFTGKQTFDFILYGNGFAVQSHTQRHNAEEPYEGN
                     LCGKAFVQRNNLKTNKRTHNGEETSECNQCCKDFVRSSALQNHEGTQTGEKLCECSPC
                     GKAFAERGSLKRHKRTCNGEKRYKCNQCCKAFVQNRFLQKHKRTHKGQTPYECHQCGK
                     AFAQTSHLQIHKRTHTGQKPYECHQCGKAFAQSSHLQIHIRTHTGEKPYECNQCGKAF
                     ADSGNLQTHKRTHIGEKPYECNQCGKAFAQRSHLQRHIRTHTGEKPYECHQCGKAFAE
                     SGTLQKHIRTHTAEKPYECHQCGKVFAGRSQLQSHIRTHTGEKPYECHQCGKSFAQRS
                     HLQSHIRTHTGEKPYECNQCGKAFSHRSTFQRHIRTHTGEKPYECNQCCKAFAGSSHL
                     QSHIRTHTGEKPYECHQCGKAFAQSSHLQRHIRTHTGEKPFNFYQCSKAFSQSSSL"
ORIGIN      
        1 cttccgggtg gtacatgctg agtcactctt cagggtgcca tgagaggagc tccgaacgcc
       61 cgacatggat gtcctgacct atgatgatgt gcatgtgaac ttcactgagg atgagtgggc
      121 attgctgaat ccttctcaga agagtctcta ccaaggtgta atgctggaga cctgtaggaa
      181 tctcagtgct ataggataca tttgggaaga caatactact gaagaatatt gtaaaagatc
      241 tggaagacat ggaaggtatg aaagaagttt tactggaaag caaacctttg attttattct
      301 gtatggtaat ggctttgcag ttcagagtca tacccaaagg cataatgcag aggagcccta
      361 tgaaggtaac ctatgtggta aagcttttgt acagaggaat aatctcaaaa caaataagag
      421 aacacataat ggagaagaaa cttctgaatg taaccaatgt tgtaaagact ttgtaagaag
      481 cagtgctctc caaaatcatg aaggaacaca gacaggagag aaactctgtg aatgtagtcc
      541 atgtggtaaa gcgtttgcag aaaggggtag tctcaaaaga cataaaagga catgtaatgg
      601 agaaaaacgt tataaatgta accaatgttg taaagccttt gtccaaaacc gctttctcca
      661 aaaacataaa aggacccata aaggacagac accctatgaa tgtcaccaat gtggcaaagc
      721 ctttgcacag accagtcatc tccaaataca taaaaggacc catacaggac agaaacccta
      781 tgaatgtcac caatgtggca aagcctttgc acagagcagt catctccaaa tacatataag
      841 aactcataca ggagagaaac cctatgaatg taaccaatgt ggcaaagcct ttgcagacag
      901 cggtaatctc caaacacata aaagaacaca tataggagag aaaccctatg aatgtaacca
      961 atgtgggaaa gcctttgcac aaaggagtca tctccaaaga catataagaa ctcatacagg
     1021 agagaaaccc tacgaatgtc accaatgtgg caaagccttt gcagaaagcg gtactctgca
     1081 aaaacatata agaactcata cagcagagaa accctacgaa tgtcaccaat gtggcaaagt
     1141 ctttgcagga aggagtcagc tccaaagcca tataagaact catacaggag agaaacccta
     1201 cgaatgtcac caatgtggca aatcctttgc acaaaggagt catctccaaa gccatataag
     1261 aactcataca ggagagaaac cctacgaatg taaccaatgt ggcaaagcct tttcccatag
     1321 aagtactttc caaagacata taagaactca tacaggagag aaaccctatg aatgtaatca
     1381 atgttgtaaa gcctttgcag gaagcagtca tctccaaagc catataagaa cacatacagg
     1441 agagaaaccc tatgaatgtc accaatgtgg caaagccttt gcacagagca gtcatctcca
     1501 aagacatata agaacacata caggagagaa accctttaac ttttaccaat gttccaaagc
     1561 tttctcacaa agcagtagtc tctaaaatct taaaagtaca cgtacaggag caaaactttt
     1621 ttgaatgcat ccattgtggt tttataacat ttatacaaag caatgacctc caaatacata
     1681 aacaatcaca tacagcagag aaacccaatg aatgtgttac atgttcttaa acccttagac
     1741 atcacaagca tcttcaactg catgactgaa taggtcctag ggaaaaatgc ttggactgta
     1801 actgatgtgg taaaaccttt cccaaaacag tcatctccta gcccataaaa taatacacac
     1861 tgaataggaa ccctatgaat gtaacaaatg tggcaaacct tttgcaaatc gcagtacgtt
     1921 ccatgtaaat aaaagaagac atactcaata gacaccctat gaatataatc agtgtgatta
     1981 tgcctgagta tgtgaacgag caatcatctt tcaaatatat aaaagaagat aaacaggagg
     2041 gacaccctat gaatgtaagc aaagtgttaa agccttcgca tatcagtcat attcaaaggc
     2101 acaaaataaa ccataattta gaaaaatcct ttgagtgtat ttaataaaac cttatgagta
     2161 catttaacct ggtcaaacct tcatgtattt ctatagactt catcaacatg aaacaatccg
     2221 tacctgataa taactatgtg aatagattta atatggggag gtcttttcaa ttctcacata
     2281 tcattatcgg ggcaaaaaat aaagctatga aggcattgaa tatggtaaag tctttgcaca
     2341 tttctaaagt ctttatcatc atgaaaataa tcatgcttta aagatatgag tgtaaacaat
     2401 gtggataagc ctttgtgcca tagggttctc tcaaatacaa cacaactcaa acacaggtga
     2461 tgaaaatggc agggatttat tgtaataatg ctgctcctgg atcatggaca gaaaatgaac
     2521 tcaaagccta aactgtgaca agtaagacat cccctaatca ctgtgacgca gaatgtcata
     2581 gagctgccat ccgacaaatc aaaatctctg accagaatgg tccctgggta aaagaactgg
     2641 aagaacaaaa atggagaaga gcctgagcaa aaggaggtcc aaattgggtt ccagctcagt
     2701 gggaggcacc aagatctgac actatgaatc aggctatggt atgcttacaa acaggggcct
     2761 atcatgactg ccttctgaaa gaccctagga gcagctgaaa gtcagatgga gacatttata
     2821 cccaaccgat gggcagaaac tggggacccc tgtggttgaa ttaggaaaag cctggaagaa
     2881 cctgaagagt gatcctatat gaataccagc agtgtcaatt aacctgggcc cctgggatgt
     2941 ctcaaacact gagcaaccgg ccaggcagca tatacatgag cataggagcc cccaagaaat
     3001 acaatagagg acatttaggt ctggacccat tcagagaaga tacacatatc ttcaggagac
     3061 ttagggtgac acaatgtggg atggtgggat ggggacatcc tcttgggtgt ggtagggagg
     3121 aggtgtgggt tgtggaacag tcagggtaga ccggaagggg gataacgctg gaatgaaaaa
     3181 aaatttaaca atcaaataag aaataaagag gaaacacatc tgggccaatt tcagatacat
     3241 tttcccactg tccagaattt acgggtagat gcttatataa agtgtcaact gttttaggat
     3301 gtgagtgtta cagtttagtc aattttattc gtttgatctt tgtgttagag tacaagtgtt
     3361 gtgttttgag gagcacaaga taaatagcca gggcattatt agagaccgtt attatgtttt
     3421 caaaaacata aagatgatta aaggaaggtg gccaccaatg ggaagtccac aactcctgtc
     3481 tgcctgggaa tgcgaactta gttttaccag atgatgaatt ggagtatgat caaaaaggcg
     3541 gggggtattt ttggggctgg ggattgtttc tttgttgctt cttcccaatt ggtgtggatt
     3601 ggttctaatg tcctctaatg ccaaattggt tccccaatta catgagaatc ctgcatttca
     3661 gacctgagac tccctatccc cagcatgttc ttattggtaa aattacaaga ggccaatgtc
     3721 gaggcagaga cagaggaatc acttttggat ttaagagcaa agaggatcac caaaccagga
     3781 aaggaattgg atgcaggctt gagaggtgag aaagacagag taccctccat gtaagtgcca
     3841 cggaagagga gcctcagcag tgtctcccca agtcagtttt gagtagcaaa gatgtgataa
     3901 agattttact aagcaatcaa tcagaactgt catagggagg gtcgttagca atgtggaggt
     3961 ttgggagtgg cccaggcaat gagatgattt atgcatatta aatacagatc tcactgtgca
     4021 tgtgtgcttg tcggggttaa attgtgtggg tgtgactgtg ggtgtgcgtg tgtgtgtgtg
     4081 tgtgtgtgtg tgtgtgtgtg tgtgtgtatc ctacatttga acatccatac cattgattgt
     4141 tgtggatgtg tacatatttt ttaaagttct gaggttcttc aggtaccaaa taggtcccat
     4201 ttggtacttc cacttcaagg atgtcatcga aggagattat ctaaagatgc tagataatgt
     4261 aaaagaaatg agatgtattt taataaaata tgtagtgtgt gtgtgtttgt gtgtgtgtgt
     4321 gtgtgtgttt actgtgatat gggttattaa ggcatgtaag atgttgagac tgggagacaa
     4381 aattttagat ccactttata cagtgttcga acttatgttg tattacatac ggtagacatc
     4441 tcctattgca aagatatgca aataaaattg ggtaaaacat tatactgctg aaaaattgtc
     4501 ttctgtacat attgtaaatc aacaagtgtt ttttcattat tgccatgtac atgagaatag
     4561 gcagcgaagt taagagaaca gacaggacaa gcagtcaaca ggctgagggt ccatctctca
     4621 ttcagttgtt tgggaacaca tataaataac aaatttcaag ctgcacatag gttatacatg
     4681 gttttgg
//
