LOCUS       XM_039106741            2040 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 431-like
            (LOC120101822), transcript variant X1, mRNA.
ACCESSION   XM_039106741
VERSION     XM_039106741.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106741.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2040
                     /gene="LOC120101822"
                     /note="zinc finger protein 431-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 32
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 6 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:120101822"
                     /db_xref="RGD:41179636"
     CDS             66..1922
                     /gene="LOC120101822"
                     /codon_start=1
                     /product="zinc finger protein 431-like"
                     /protein_id="XP_038962669.1"
                     /db_xref="GeneID:120101822"
                     /db_xref="RGD:41179636"
                     /translation="MDVLTYDDVHVNFTGEEWALLNPSQKSLYQCVMLETCRNLSAIG
                     YIWKDHTTEEYCKSSGRLGRYERSSNGKQTFDFILYGNGFAVQSHTQRHNAEEPYEGN
                     LCGKAFVQRNNLKTHKRTHNGEEPSECNPCCKGFVRSSALQNHEGTQTGEKLYECNQC
                     GKAFAQRSSLKRHKRTCNGEKRYKYNQCRKAFVQNHGLQKHKRTHTVQKPYECNQCGK
                     AFAKSSTLQNHKRTHTEEKPYECNQCGKAFEGSSHLQSHIRIHTGEKPYECHQCGKAF
                     AQSSHLQRHIRTHTGEKPYECNQCGKAFAQSNNLQNHKRTHTGEKPYECNQCGKAFAR
                     SNNLQNHKRTHTGEKPYECNQCGQTFAYSSTFQQHKRTHTGEKPYECNQCCKAFAGSS
                     HLQSHIRTHTGEKPYECNQCGKAFPHSSSLQQHKRTHTGEKPYECNQCGKAFAQRGNL
                     QIHKRTHTGEKPYECNQCGQTFAYSSSIQQHKRTHTGEKPYECNQCGKAFAQRNTLQI
                     HIRTHAGEKPYECNQCCKAFAYNSSLQKHKRTHTGENPYESNQCCKAFSGISHLQSHI
                     RTHTGEKPYECNQCGKAFAESSYLQRHIRTHTGEKPFNFNQCSKAFSQSSGL"
ORIGIN      
        1 gcttcctggt ggtacatgct gagtcagtct tcatggtgct gtgagaggag gtcagaacgc
       61 ccgacatgga tgtcctgacc tatgatgatg tacatgtgaa cttcactggg gaagagtggg
      121 cattgctgaa tccttctcag aagagtctct accagtgtgt aatgctggag acctgtagga
      181 atctcagcgc tataggatac atttggaaag accatactac tgaagaatat tgtaaaagtt
      241 ctggaagact tggaaggtat gaaagaagtt ctaatggaaa gcaaaccttt gattttattc
      301 tgtatggtaa tggctttgca gttcagagtc atacccaaag gcataatgca gaggagccct
      361 atgaaggtaa cctatgtggt aaagcatttg tacagaggaa taatctcaaa acacataaaa
      421 ggacacataa tggagaagaa ccttctgaat gtaacccatg ttgtaaaggt tttgtaagaa
      481 gcagtgctct ccaaaatcat gaaggaacac agacaggaga gaaactctat gaatgtaatc
      541 aatgtggtaa agcctttgca caaaggagta gtctcaaaag acataaaagg acatgtaatg
      601 gagaaaaacg ttataaatat aaccaatgtc gtaaagcctt tgtccaaaac catggtctcc
      661 aaaaacataa aagaacccat acagtacaga aaccctatga atgtaaccaa tgtggcaaag
      721 cctttgcaaa gagcagtact ctccaaaacc ataaaagaac acacacagaa gagaaaccct
      781 atgaatgtaa ccaatgtggc aaagcctttg aaggaagcag tcatctccaa agccatataa
      841 gaattcatac aggagagaaa ccctacgaat gtcaccaatg tggcaaagcc tttgcacaga
      901 gcagtcatct ccaaagacat ataagaactc atacaggaga gaaaccctac gaatgtaacc
      961 aatgtggcaa agcctttgcc caaagcaaca atctccaaaa ccataaaaga acacacacag
     1021 gagagaaacc ctacgaatgt aaccagtgtg gcaaagcctt tgcccgaagc aacaatctcc
     1081 aaaatcataa aagaacacac acaggagaga aaccctatga atgcaaccaa tgtggtcaaa
     1141 cctttgcata cagcagtact ttccaacaac ataaaagaac acacacagga gagaaaccct
     1201 atgaatgtaa tcaatgttgt aaagcctttg caggaagcag tcatctccaa agccatataa
     1261 gaactcatac aggagagaaa ccctatgaat gtaaccaatg tggcaaagcc tttccacaca
     1321 gcagtagtct ccaacaacat aaaagaacac acacaggaga gaaaccctac gaatgtaacc
     1381 aatgtgggaa agcctttgcc caaagaggca atctccaaat tcataaaaga acacacactg
     1441 gagagaaacc ctatgaatgt aaccaatgtg gccaaacctt tgcatacagc agtagtatcc
     1501 aacaacataa aagaacacac acaggagaga aaccctacga atgtaaccaa tgtggcaaag
     1561 cttttgcaca aagaaatact ctccaaatac atataagaac tcatgcagga gagaaaccct
     1621 atgaatgtaa ccaatgttgt aaagcctttg catacaacag tagtctccaa aaacataaaa
     1681 gaactcacac aggagagaat ccctatgaaa gtaatcaatg ttgtaaagcc ttttcaggaa
     1741 ttagtcatct ccaaagccat ataagaacac atacaggaga gaaaccctat gaatgtaacc
     1801 aatgtggcaa agcctttgca gaaagcagtt atctccaaag acatataaga acacatacag
     1861 gagagaaacc ctttaacttt aaccaatgtt ccaaagcttt ctcacaaagc agtggtctct
     1921 aaaatcttaa aagtacacgt acaggagcaa aacttttttg aatgcatcca ttgtggtttt
     1981 ataacattta tacaaagcag tgacctccaa atacataaac aatcacatac aggagagaaa
//
