LOCUS       XM_039106702            2428 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus protein NDRG3-like (LOC120101769),
            transcript variant X3, mRNA.
ACCESSION   XM_039106702
VERSION     XM_039106702.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086021) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2428
                     /gene="LOC120101769"
                     /note="protein NDRG3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 55
                     ESTs, 37 long SRA reads, 1 Protein"
                     /db_xref="GeneID:120101769"
                     /db_xref="RGD:41265125"
     CDS             13..1065
                     /gene="LOC120101769"
                     /codon_start=1
                     /product="protein NDRG3-like isoform X3"
                     /protein_id="XP_038962630.1"
                     /db_xref="GeneID:120101769"
                     /db_xref="RGD:41265125"
                     /translation="MMGSLPSRGKAYPAQDPVRLVQARDLQADKSCFNTFFNFEDMQE
                     ITQHFAVCHVDAPGQQEAAPSFPTGYQYPTMDELAEMLPPVLTHLSMKSIIGIGVGAG
                     AYILSRFALNHPELVEGLVLINIDPCAKGWIDWAASKLSGLTTNVVDIILAHHFGQEE
                     LQANLDLIQTYRLHIAQDINQENLQLFLGSYNGRRDLEIERPILGQNDNRLKTLKCST
                     LLVVGDNSPAVEAVVECNSRLDPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMG
                     YIPYVQLSHLSSESVPSASMTRLARSRTHSTSSSIGSGESPFSRSVTSNQSDGTQESC
                     ESPDVLDRHQTMEVSC"
     polyA_site      2428
                     /gene="LOC120101769"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gactgctgag gaatgatggg aagtttgccc agcagaggga aagcctaccc agcccaagat
       61 ccagtacgtc tggtccaggc cagagaccta caagcagata aatcctgctt caacacgttc
      121 ttcaactttg aggatatgca agagatcacc cagcactttg ctgtctgtca cgtggatgcc
      181 ccaggccaac aggaagcagc accctccttc ccaacagggt atcagtaccc caccatggat
      241 gagctggctg agatgctgcc tcccgttctt acacacctga gtatgaagag catcattggc
      301 attggagttg gagcaggagc ctacatcctc agcagatttg cactcaatca tccagagctg
      361 gtagaaggtc ttgtgctcat taacattgac ccgtgtgcta aaggctggat tgactgggca
      421 gcttccaaac tctccggctt gaccaccaac gtcgtggaca taattttggc tcatcacttc
      481 gggcaggagg agttgcaggc caatttggac ctcattcaaa catacagact gcacattgct
      541 caagatatca atcaagaaaa tctccagctc ttcctgggtt cctataatgg acgcagagac
      601 ctggagatcg aaagacctat tctgggccaa aatgataaca gattgaaaac attaaagtgt
      661 tctactttac tggtggttgg ggacaattca cctgctgtgg aagctgtggt tgaatgtaat
      721 tctcgcctcg accctataaa tacaactttg ctaaagatgg cagactgtgg aggactgccc
      781 caagtagttc agcctgggaa gctcaccgag gccttcaagt actttttgca gggaatgggc
      841 tacatcccgt atgtgcagct cagtcacctc agcagcgagt cagtaccatc tgccagcatg
      901 acccggctcg cccgatcacg aacccactcc acctcaagta gcattggctc tggagaaagt
      961 cccttcagca ggtctgtgac cagcaatcag tcagatggaa ctcaagaatc ctgtgagtcc
     1021 cctgatgtcc tggacagaca ccagaccatg gaagtgtctt gctaagcaga tgctcctccc
     1081 ctggaccatg caagtccctc ctccttgaaa tgaccactcc ataatagaac atttcattcc
     1141 gtcagctggc ctccactttc tttcactcat gcatggccac agcatctctc tctagtaggc
     1201 tggattatca ttctctctgc ccttttgtat gtaccgagaa ccacacccat gccattactg
     1261 taacattcca acaccttgat ctgatccgat ctccatatct tctcttgcca gcctttccct
     1321 gcgctccctc aaatatgtat ctgacgagac tctttaattc ccaactccat gtgtgtgcga
     1381 gcacgcgtgt ctgtgtctgt gtgtgcatag ttctgtgatt ttagacatgc tttcttgtag
     1441 tgcttctgca aagggacttt tttgaattct cagtggcatt tttaagggaa atatgcagag
     1501 tggatatctg ggtgggatag gccacaagat tggattttgg ttccacttgg acaactaaca
     1561 atatttgtag agtgatttca ggagagagca ggtctgagga atatgtgagg ctatagttac
     1621 tgtgtgggcc actggtgagg taacgattac acagataggc aggcagggtg gcagtcacct
     1681 cccctgtcca cgtggattca tacctgtcat cgtgtaagtc agagggaggg atctgaagcc
     1741 tgtgagtgat gtctggtaca ctgtggagtt ttctccagag aagtggccta agccctcggt
     1801 tagccgagaa agatggaaag caaagcgcca ggcttcgctc tacagagaga aagtgctgtc
     1861 cctgtagcat ctgagtccac ttaccagaca cccaggcatc agcaggaagt gcctcctggt
     1921 ctgagggaga gcggttctcc atccctcggt cccagagaac agagtgatat ttgaaaatgc
     1981 catcgatggt gagggtttta ttggggaaga ggaaggaccg ttagcacaca ccatcatggt
     2041 aaataagtgg agcctaagtg tcagcagaca tgatgaaagc caagtcacct tgaaggtgac
     2101 ttttctggga aggtcttaag catgtaatgt cccttaatag gagggaaagg gacaatctca
     2161 gggcagcctt gtccaggtag aaatattttg cccccctgtc tgttgttggt gaggggtcac
     2221 accagccagg gagaccctct gggaagaagc tgccacacac aaggactctg gaaggatcca
     2281 catgtgagcc cagccagggt catacggttc ccaacctgag gaaaaggttt ttcacacact
     2341 ccttgctttc tgctgagata agaaaggtgt cactctgcag agtgtgactt tttacaggtt
     2401 aaataaagct gtatatgtct cattgtta
//
