LOCUS       XM_039106577            2021 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus igE-binding protein-like
            (LOC120101677), partial mRNA.
ACCESSION   XM_039106577
VERSION     XM_039106577.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..2021
                     /gene="LOC120101677"
                     /note="igE-binding protein-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120101677"
                     /db_xref="RGD:41020731"
     CDS             <1..1233
                     /gene="LOC120101677"
                     /codon_start=1
                     /product="igE-binding protein-like"
                     /protein_id="XP_038962505.1"
                     /db_xref="GeneID:120101677"
                     /db_xref="RGD:41020731"
                     /translation="FRSVEEREWGKNAPGEIKQRKEKKVLKSRSLYPVKDSKTSELDS
                     SETDELSSSEGEDLEDEAARCEKERCYPDEQRANSLGKQKEVGGGNHVVSQPISPSAS
                     PSYMERFHSDSFLTKEEKKKIQQAFPVFEAADGGHVHAPVEYIQIKELAESVRNYGVS
                     ANFTIAQVERLATLAMTPGDWQTTVKVALPNMGQYMEWKALWYDASQAQAKVNAIAEG
                     NQRDWTLDLLIGQGQYANNQTNYDWGAYAQISTAAVKAWKALSKKGESGGHLTRIIQA
                     PQEPFSDFVARMMEAAGRIFGDPEQAMPLVEQLVYEQATQECRAAITPRKSKGLQDWL
                     RVCRELGGPLTNAGLAAAILQGQKCSGTGDHKVCYNCDKPRHLKKECQALTRKRAPGL
                     CTKCGKGYHWASECRSLS"
ORIGIN      
        1 tttagatccg tggaagagag agaatgggga aaaaacgccc caggtgagat aaaacagagg
       61 aaggagaaaa aggtcttgaa aagcagaagt ctttatcctg taaaggattc aaagacttca
      121 gagcttgata gctcagagac agacgagctt agctcctctg agggagagga tttagaagat
      181 gaggcagctc gctgtgaaaa agaaagatgc tacccagatg aacaacgagc taacagcttg
      241 ggtaaacaaa aggaagtggg aggtggaaac catgtggttt cccagcctat aagtcctagc
      301 gcctctccgt cttatatgga gagattccac tcagattcct tcctcactaa agaggaaaag
      361 aaaaagatac agcaggcatt cccggtgttt gaggctgccg atggaggcca tgttcacgca
      421 ccagtagaat atattcaaat taaagaactt gccgagtcgg tccgtaacta tggagttagt
      481 gccaatttta ctattgctca agtcgaaagg cttgctactc tggccatgac tccaggagac
      541 tggcagacaa cagtgaaggt tgcgcttccc aatatgggac aatatatgga atggaaagcc
      601 ttatggtatg acgcctctca ggcacaggcc aaagtcaatg ccattgctga aggcaatcag
      661 agagactgga cgcttgatct gctaatagga caagggcaat atgccaataa tcaaactaac
      721 tatgactggg gagcatatgc tcaaatttcc actgccgccg ttaaggcatg gaaggcactt
      781 tccaagaagg gagagtccgg gggacactta acgagaatca tacaagcccc ccaggagcca
      841 ttctcagact tcgtggctag gatgatggag gcagcaggca ggatctttgg agaccctgaa
      901 caggcaatgc ctttagtgga acagttggtc tatgagcaag ccacacagga atgcagagca
      961 gctattacac ctaggaagag caaaggatta caggactggc taagagtttg ccgagaactt
     1021 ggaggcccgc ttactaatgc cggccttgcg gctgctatcc tacagggcca aaagtgctca
     1081 ggtacaggtg atcacaaggt ctgctataac tgtgacaaac caagacattt gaaaaaggag
     1141 tgtcaagccc tcactaggaa gagagcacca ggactgtgta ctaagtgtgg gaaaggctat
     1201 cattgggcta gtgagtgtcg gtcgctcagt taaagatatc agaggcaggc ttattcagcc
     1261 cgggcctccc caggcaaaag ggggcgaaaa cattccaaaa aaacgggtat ctgggcccca
     1321 ggtctcaggg ccccaaaaca tatgggactc cagcttacaa cagatggata ccacggttca
     1381 cagagccaca agaggctcaa caggagtgga cctctattcc accacccaat tcatattaat
     1441 gccactgatg ggtgtacaac ctgtccccac tgactacaaa ggccccctac ccgtgggaag
     1501 tgttggcctt gttatgggac ggtcctcctt aactttaaag ggactaattg ttcaccctgg
     1561 aacttgcttg ttgtatattt gtgtatgtag tgtaacgaat ttgtacaata gaggaccgta
     1621 actactgtta ggttgtacag attgaaattt agatgttcca ttggctgtct gaaaaggtgt
     1681 ggattgtcct tcctagagag atctacttaa aaactgcttc gtgacaaaaa ccacacctga
     1741 agaaatttta agaatttggc acagttagtc actttgtgtc atccggaatc tagctgctga
     1801 gtcttgcaaa gtaaaccccc tgttgactga tgtcagttga gctagtgaat gaatagatgg
     1861 agaaacgtca gtcagtcgct gaggaagtgg atttcccagt aggggtttct gcagctcacc
     1921 tgtatagtcc tgcgcatgtt ccccacacag aacccactgt atttacctgt tctacttgtc
     1981 acctttcaat aaagcatatc aaatgttgat acaaaaaaaa a
//
