LOCUS       XM_039106101            2066 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus zinc finger and BTB domain containing
            6 like 1 (Zbtb6l1), mRNA.
ACCESSION   XM_039106101
VERSION     XM_039106101.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086021) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2066
                     /gene="Zbtb6l1"
                     /note="zinc finger and BTB domain containing 6 like 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 ESTs, 421 long SRA reads"
                     /db_xref="GeneID:120101486"
                     /db_xref="RGD:41083260"
     CDS             1..1056
                     /gene="Zbtb6l1"
                     /codon_start=1
                     /product="uncharacterized protein Zbtb6l1"
                     /protein_id="XP_038962029.1"
                     /db_xref="GeneID:120101486"
                     /db_xref="RGD:41083260"
                     /translation="MNKNGCVCQYYSSNFKNGNDSYPYLLPKDRKNSLAVLHAIAPSH
                     IPWSSHLPPGRLSPPWALFGQGSYLHHSDRLHHPSALVSVSRVAEKETLRQDLISGTS
                     SKTPLPNWGKQRRKPASARVDSSVVRGVPSAGVGERWPFERFASHQKALPERGASSGP
                     RFRRVRCGPPLPNLGVPAAATVHRPPGRDSSPPHLWGPGSRARAPAASCPPPPYLRGP
                     GGVAKGRSRGPRDGAARRRRRLVSPGQSSAAVSGPQTPSGATGTAPLAAAKAATGPPP
                     PPSLRLLLLLLLLLLLLLTTEADLEGSRFSSREKILFTSREITQARELGWKGSVVAAP
                     PKLRISFPLKKKATFVT"
     polyA_site      2066
                     /gene="Zbtb6l1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atgaacaaga atggctgtgt ctgccagtat tactccagta atttcaagaa tggaaatgac
       61 agctaccctt atctccttcc taaagacaga aaaaattccc tggctgtgct tcatgccatc
      121 gctcctagtc acatcccctg gtccagccat ctccctccag ggaggttaag ccctccctgg
      181 gcattgtttg gccagggttc ctatttacac cactcagatc gcctccacca tcccagcgct
      241 ttggtctcgg taagccgggt ggctgaaaag gaaacgctaa gacaggacct gatctcgggg
      301 acctcctcga aaacccctct tcctaactgg ggtaagcaaa gaaggaagcc ggcctccgct
      361 cgggtggact cctcagtggt gagaggcgtc ccttcagccg gtgtcggaga aaggtggcca
      421 tttgagcgtt tcgcttcgca tcaaaaagcc ctaccagagc gaggggcctc ctccggcccc
      481 aggttccgcc gtgtcaggtg cggcccgccg ctcccaaacc tcggggtacc ggcggcggcc
      541 acggtgcaca ggccgccggg cagagacagc tccccgcccc acctctgggg acccggcagc
      601 cgggccaggg ccccagccgc atcttgtccg cccccgccct acctgagggg cccgggcggg
      661 gtcgctaagg gccgctcccg ggggccccgc gacggcgcgg ctcggcgacg gaggcgcctc
      721 gtctcgccgg ggcagagctc ggcggcggtt tcagggcctc aaactccatc gggagctaca
      781 gggacagccc cgttggcggc ggcgaaggcc gcgacggggc ctcctcctcc tccctccctc
      841 cgcctcctcc tcctcctcct ccttctcctc ctcctcctcc tcaccacgga ggcggacctg
      901 gagggatccc gatttagctc tcgcgagaag atactgttca cttcacgcga gattacgcaa
      961 gcccgggagt tgggttggaa gggaagcgta gtggccgcgc cacctaaact gcgcatcagt
     1021 ttccctctga agaagaaagc caccttcgtc acatgacaag ggaaccccag agtactgtgg
     1081 gagatgatgc gaggactagg caagacgaag ggccttatgg gaaactccct gtacatctaa
     1141 gcctcgagcc agaccagctg gatcgagcca acgttaaaat tatcatccat agatacatct
     1201 atgttacatc ctactttact ctcttgtagt gagatagtaa ccagattagc aaataattct
     1261 ccagtttaca aagatcagga tcaaagtgaa aacgtttggc aaacccacct acgtcatcta
     1321 aaatcccaaa tgcctcaaag gaggaaaaga tgagaattta caagttttgg aattgtaact
     1381 caatttttta gaggacttat ggcaaactgt aagggaaata catgcctgcg ttggatgagg
     1441 tacagggctg tggaaactgc ccgttttcta tatcatctgt atggatggat tccacatgaa
     1501 ggatacaaat ttcattctct ttaaagccac catctactgt tgagagctct ggtgacttca
     1561 ctccccttcg ctctgatgtc agtgtctctg cagcagattg taatgcatcg ccttcctcct
     1621 ctttgacagg aggatctagg tttacaggac tatcttctga aatttcaatg atctcacagt
     1681 ctttatcaga attttcttct tcattcttaa catctgtatc tgaagattga cacaagtcag
     1741 tgtgttggtt atttttcata gaaagatcaa tttccaaata ctttgacaaa gcttctgtgc
     1801 atttttccac aatgtgaacc atctgaaggt aactggcagc agtcaagtat ttcaaaagct
     1861 cttttctttt tacttcaagt gctccagtat agcaggacaa cagcaacttc ctgccaactt
     1921 ctgcactctg cagaatggta attctgatgt gttttgactg tgtgagtaaa aactgatctc
     1981 tcataaaagt ggagcaagca gccaaaatca ccttgtgccc ctggaactca gtatcgttaa
     2041 tataaatcga tacatcacaa aataaa
//
