LOCUS       XM_039104066            1384 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus histone H3.v1-like (LOC120101100),
            transcript variant X1, mRNA.
ACCESSION   XM_039104066
VERSION     XM_039104066.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039104066.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1384
                     /gene="LOC120101100"
                     /note="histone H3.v1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:120101100"
                     /db_xref="RGD:41348865"
     CDS             16..345
                     /gene="LOC120101100"
                     /codon_start=1
                     /product="uncharacterized protein LOC120101100 isoform X1"
                     /protein_id="XP_038959994.1"
                     /db_xref="GeneID:120101100"
                     /db_xref="RGD:41348865"
                     /translation="MVLEKQLRVLHPHPQMSVPPWPDRRKDEDQSMGSAYLSTEDQEQ
                     SSHRVFSTERTARKESNRKPELERNPRESSASKVGRVHLGSILSGRTSTAGGKFIGNS
                     QNNLRKE"
ORIGIN      
        1 agcacagaag cagacatggt gctggagaag cagctaagag ttctacatcc tcatccacag
       61 atgtcagtcc caccgtggcc agacaggagg aaagatgagg atcaaagtat ggggtctgct
      121 tacttatcca cagaagacca ggaacaaagt tcccacagag tattttcaac tgaaaggact
      181 gcaagaaagg agtcaaaccg aaagccagaa ctggagagga atccccgcga gtcttccgcc
      241 agcaaagtgg gccgtgtgca cctgggaagc atcctttctg gaaggacaag cactgctggg
      301 gggaagttca tcgggaacag tcagaataat ctgagaaaag agtaaattct tatacaagct
      361 caatgaattt aaaccctcct catgttgggt aatttggagt agactgagcc agttccaaac
      421 cacagtattt cggctttagc atgatcttgt ctggtaatga tttaaatttg atagcaagcc
      481 aaaattccaa cttttttttt acctctcccc ccaaattgat gtagagagct atgaatttat
      541 catacactga aatcattttt atattgccgt ctaactattt ttatagacgg atcgtatttt
      601 caagaaaaag aaacactgat ttcatgtccg tattttccat tggtagaacc catgacgaat
      661 acctagcttt ctgatggcta gcttttgact tctttcttcc cggtagtaga aagtaatgtg
      721 actctatctg tggctcagaa gggccccatg catggcatag cacaattttg aaaagagaca
      781 gatggaaaga gtttattctt agtgtgaaaa gctataattt attcctcagt aaacaaataa
      841 attaaagacc attcacattt ggatttgacc agaaacaaat gtgagaggcc ttccctgggg
      901 tgtgatggta gctttagggt ccttttaagt aaacaaaact tgagcctacc attgacattg
      961 gtatttggtg cataataaag agggggaggt cgtgatcctc attcttaggc tgtgaccatc
     1021 tcccacgacc caaggtccat gtgccacact ctagtaaact cgttaataat gcctttgcat
     1081 ctaaagagga gaacaattac agacacttca tcctgaatat catcatattg aatgaaacaa
     1141 ggaatgtagg gatgggtgaa ggcgagtcta ccgacctttg ttatgagcaa ctctgtttct
     1201 ccaacccttg gtccattgtt cacataattt ggcttaaaat attcccagca tcttggacat
     1261 tttataataa atggcaatgc atgttttcat tgaagtatga agtcccagag ttccagagtg
     1321 gacacagtga tgcatgatgt aattccagtg aattgggagg taaggataga agaacagctt
     1381 gaaa
//
