LOCUS       XM_039103949            1479 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus translation initiation factor
            IF-2-like (LOC120101061), mRNA.
ACCESSION   XM_039103949
VERSION     XM_039103949.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1479
                     /gene="LOC120101061"
                     /note="translation initiation factor IF-2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 7 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:120101061"
                     /db_xref="RGD:41053275"
     CDS             30..635
                     /gene="LOC120101061"
                     /codon_start=1
                     /product="translation initiation factor IF-2-like"
                     /protein_id="XP_038959877.1"
                     /db_xref="GeneID:120101061"
                     /db_xref="RGD:41053275"
                     /translation="MARRLHLRPAGGKLKNTCEKKKKTGSGTERRDTLDKGRREPSIR
                     QRPSNGRASRALGPGPHGRPEGDRDTAPRPPPLEGPATGGGPLSLREHQVEGGNGNPS
                     CGRPMGSRATPSPGVFKLLSRNRTARYPDRSGVDTRGPEGGSGCESPPVAQAPPACDG
                     DTPAPSERESCGRGAAGAVRRGSGSRPPCTAPPTPPPVHTR"
ORIGIN      
        1 ccccctgctg aaccggaaga gaggggccaa tggcgaggcg gctccacctc aggccggccg
       61 gtgggaaact aaagaataca tgtgaaaaga aaaaaaagac agggtcggga acggaaagga
      121 gggacacact ggacaaggga cgccgtgaac ccagcatccg gcagcggcca tccaatgggc
      181 gggcaagtcg ggctctcggg cccggacccc atgggcgccc agagggggac cgcgacacgg
      241 ccccccgacc gccgcctctg gaagggccgg caaccggagg gggcccgctg agtctcaggg
      301 agcaccaggt ggagggagga aacgggaatc cgtcctgcgg acgaccgatg ggcagtaggg
      361 cgaccccctc ccccggggtc tttaaactct tgagccggaa caggacagct aggtacccgg
      421 acaggagcgg ggtggacacg cgaggtccag aaggcgggtc gggctgcgag agcccacccg
      481 tggcacaggc accccctgca tgcgacggag acaccccggc accttcagag cgggagagct
      541 gtggcagagg tgcggcaggt gccgtgagga gagggagcgg gtcccggcca ccgtgtactg
      601 cgccccccac accccccccc gtgcacacga gatgagatca cgagccggtt cagaaagagg
      661 cagaatgacc tcggtatgcc gagggccttg gctggccagc aggcaaggga ggtgccggct
      721 gaggaggcag cagtggtgga gtcagaggcg ggtgcacgga ggcaaggaca taggcagaag
      781 agcaagggag agagagagaa ttgaggaggt ccctcgacgg accacacctg acaccctccc
      841 cgcacctctc cttaacgacc cccggctttc ccaaaatgct cacttggccg gcggccacgg
      901 cacatgccac gaatacgacc gggacccggg gacgcgtctc ccggtgagag gagggactta
      961 cacaggcccg agaaaggacc agacaccccc tcggccttct ccattaatga tccttccacc
     1021 ggttcaccta cagaaacctt gttatgattt ttacttcctc tagatagtca agttcgacct
     1081 tcttctcagc cctccgacag ggccatgggc tgatcaggcc tcaataaacc attcaatctg
     1141 tagtagggaa gggtggtgtg tacaaagggc agggcttatg accggcactt actgggaatt
     1201 cctcgttcat ggagaataat tgcaatcccc gatgtccatc acgaatgagg ttcaatgggt
     1261 tacccgcgcc tgcctttgta gggtaggcac acactgagcc aatcagtgtg gcgctaatgc
     1321 agccccggac atctaagggc atcacagacc tgttattgct caacctccgt cggcgtcccc
     1381 caacttctta gagggacaag tggcgttcag ccacccgaga ttgagcaata acaggtctgt
     1441 gatgccctta gatatccggg gctgcattag catcacact
//
