LOCUS       XM_039103946            1090 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uncharacterized LOC120101053
            (LOC120101053), mRNA.
ACCESSION   XM_039103946
VERSION     XM_039103946.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1090
                     /gene="LOC120101053"
                     /note="uncharacterized LOC120101053; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 85%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 14 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:120101053"
                     /db_xref="RGD:41244219"
     CDS             1..1029
                     /gene="LOC120101053"
                     /codon_start=1
                     /product="uncharacterized protein LOC120101053"
                     /protein_id="XP_038959874.1"
                     /db_xref="GeneID:120101053"
                     /db_xref="RGD:41244219"
                     /translation="MQPSAFRRPHRRTHAAAAGGKPGRDAHCKRTGGSPALFPGPGRN
                     LLPRPTLPRQTSSPRTPSCRNLTQLQAATWQRATWHEPASNPNLERSNSTKTPFPVHC
                     HPGQVRVSLPNDVPKLNAVVAISPQIFPALSSTGNQGAKLMGSRGAAACGHSAPPAAP
                     RARCTCGSSSSPPSSLRPAPRVCRTCSARSAPRATAAAAESLWAASATSGARPRARAG
                     PARSRGAHRRGRGRAARCGLAPLSGSFPLSFSFSRSRLLQFVKDPPEPVSWGDSGGVK
                     RSALGSTGGTESLRWLALLEATRVGECTVARAIWCVYRQFDDVFQHNNRRRKAQGSLV
                     LCGTRWLS"
ORIGIN      
        1 atgcagccca gcgcctttag aagaccgcac cggcgcaccc acgcagcagc tgcgggaggg
       61 aagccgggca gagatgctca ctgcaaaagg actggaggca gcccagccct cttccctggt
      121 cctgggagga atttacttcc tcgccctact ctgccacgtc aaacttcctc acccagaaca
      181 ccaagttgca gaaacctgac tcagctgcaa gcggcgacat ggcagagagc cacttggcac
      241 gaaccggcct cgaatccaaa cctcgagcgc tcgaattcta caaagacacc cttccccgtc
      301 cactgtcacc cggggcaagt tcgcgtttcc ctcccgaatg atgtcccgaa gctgaacgct
      361 gtagttgcca tttcccctca gatatttcca gccctctctt ccacagggaa ccagggagcc
      421 aagttgatgg ggagtcgcgg tgcagccgcg tgtggacact ccgcaccccc agccgcgccc
      481 cgagctcgct gtacctgtgg ctcttcatcc tcccctccct cctccctgcg ccctgcgccc
      541 cgcgtctgcc gtacctgctc tgcacgctcc gcgccccgcg ccaccgccgc cgccgccgag
      601 tcgctctggg ctgcgagtgc cacgtcaggc gcccggccgc gcgcgcgcgc tggacccgct
      661 cgctcccgcg gcgcgcaccg gcgggggcgg ggccgcgccg cccgctgcgg cctcgcgcct
      721 ctttccgggt cttttcctct aagcttttcc ttctcgaggt cccgcctcct ccaatttgtc
      781 aaagatcctc ccgagccagt gtcgtggggg gactcgggtg gggtgaagag gagcgctctg
      841 ggttcaacag gtggcactga atcgctgcgc tggctcgcct tactggaagc gacgcgtgtc
      901 ggggagtgca cagttgcaag agcaatctgg tgcgtgtaca gacaatttga tgacgtcttc
      961 cagcacaaca acagaagaag gaaggcccaa ggcagcctgg ttctgtgtgg aacgagatgg
     1021 ctcagctgag gatcacttgg ccaactgtaa caaactgcaa caactgcaac aacagcaacc
     1081 agcaaccagc
//
