LOCUS       XM_039103932            1083 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus TD and POZ domain-containing protein
            2-like (LOC120101040), mRNA.
ACCESSION   XM_039103932
VERSION     XM_039103932.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103932.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1083
                     /gene="LOC120101040"
                     /note="TD and POZ domain-containing protein 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 16 Proteins, and 34% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120101040"
                     /db_xref="RGD:41009569"
     CDS             1..1083
                     /gene="LOC120101040"
                     /codon_start=1
                     /product="TD and POZ domain-containing protein 2-like"
                     /protein_id="XP_038959860.1"
                     /db_xref="GeneID:120101040"
                     /db_xref="RGD:41009569"
                     /translation="MSGDLEAKICGYTHISVQKFYYKWTISNFSFCMDGIWENITSPE
                     FSLEANEEVKWCLRIFPNGVDEESKDYLSVSLCLHSCPKSPVLAKVHFWIINAQGEKH
                     QIEEIPNILSFSPKQQWGLRKFILRDFLLSLRHWLLPEDQLILCCKVFIVGPSFSTPG
                     HNMTPANKDPRQKLADDIGELWEYSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFE
                     HEMLESLTNRVEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATDLLAAADMYDLQDLK
                     VMCEDSLCRNLSVKNAVPTLILADLHSTEHLKTRVMDFIILHASEVSKTLEWKSMVES
                     HPHLVEEAFLSLASIQCFSSEPSLKH"
ORIGIN      
        1 atgtcagggg acctggaagc caagatctgt ggctacacac atatcagtgt tcaaaaattc
       61 tactacaagt ggaccattag caacttttca ttttgcatgg atggaatttg ggaaaatatt
      121 acaagcccag agttctcatt agaggccaat gaagaagtaa aatggtgttt gagaatattc
      181 ccaaatggtg ttgatgaaga aagcaaagat tacctgtctg tttccctgtg tttgcacagt
      241 tgtccaaaga gcccagtttt ggcaaaggtg cacttctgga tcataaatgc ccaaggagag
      301 aaacatcaaa tagaagagat cccaaatatt ttaagcttta gtccaaaaca acaatgggga
      361 ttgagaaagt tcatccttcg agatttcctc ctctccctta ggcattggct tctccctgaa
      421 gaccagctca tcctgtgttg taaggtgttc atagtaggac cctcctttag cacacctgga
      481 cataacatga cacctgcaaa caaggatcca aggcagaagc ttgctgatga cataggagag
      541 ctgtgggaat attccctctt cacagactgc agcctggtgg tagctggcca ggaattcaga
      601 gctcacaagg ccattctagc agctcgctct ccagttttca gagccatgtt tgaacatgaa
      661 atgctggaga gcctaacaaa ccgtgtggag atccatgaca ttcacctgca agtctttaag
      721 gaaatgatgg ccttcattta cacagggaag gcaccacacc tccacagcca ctcaatggcc
      781 actgatttgt tggcagctgc tgacatgtat gacctgcagg acttgaaggt catgtgtgag
      841 gattccctgt gcaggaacct cagtgtgaag aatgctgtac caactctgat cctggctgac
      901 ctccacagca cagagcacct gaagactagg gtcatggatt tcattatact tcatgcttct
      961 gaagtctcta agaccttgga gtggaagtca atggtggagt cacatcccca cttggtggag
     1021 gaagcatttc tctccctggc ttctatacag tgtttttcct cggagccttc actcaaacac
     1081 tga
//
