LOCUS       XM_039103708            2151 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus guanine nucleotide exchange factor
            MSS4-like (LOC120100841), transcript variant X2, mRNA.
ACCESSION   XM_039103708
VERSION     XM_039103708.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2151
                     /gene="LOC120100841"
                     /note="guanine nucleotide exchange factor MSS4-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 3 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     2 samples with support for all annotated introns"
                     /db_xref="GeneID:120100841"
                     /db_xref="RGD:41144596"
     CDS             1450..1821
                     /gene="LOC120100841"
                     /codon_start=1
                     /product="guanine nucleotide exchange factor MSS4-like"
                     /protein_id="XP_038959636.1"
                     /db_xref="GeneID:120100841"
                     /db_xref="RGD:41144596"
                     /translation="MEPCELQNELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLF
                     LPSMRKKPDLVDGSNPDGDLLEKHWLVNDMFIFENVGFTKDVGNVKFLVCADCEIGPI
                     GWHCLDDKNSFYVALERVSHE"
ORIGIN      
        1 tgttgctggc atttttatga ttagcgtatt tttattattt ccatctcagt gccagtgttt
       61 gatgagctac gctggataat gagggaggag agcgggccag ggaaacagca gaagttctag
      121 tttgggacaa agtccccttt cagaacgtgt cagacagatg gcagagaagg cagtactggg
      181 gaatgtcatc acgctgctcc cgctcaccct tcaggtctac ccacacacca ctacatgtca
      241 agaatatgta tttggcccta ttcctatgtt gtgaagtatc gaaggatacc gtttggctct
      301 gctcaacacg gatgtccacg gtggtccacg ctgtcgggac cgaacagaag cctgaaatat
      361 gttgttgcct tcttaccttc aggtagaaga atggggtgtg gataccagct ctattgtcag
      421 gtgtttcgtc tgtaggcatg tctgtgaacc acttgcatgc ctagtgtcta gggaagtcag
      481 aaaagggcat cagatcccct gggactgtag ctccacctgg atgtgagcac cagacaaaag
      541 caatgcaggg gagaaaccag cttgtttggc tcctgctgtc attgagagca gtcagcaaga
      601 actatggagg aacgctgctt ctcggctcat tctctgactt tcctttggct tatacagccc
      661 agaaacccta cctatagtgg actgtgcctt cccacatcaa ccgagacagt cctccacaaa
      721 tatatcacgc ttgtgagcct agtgcctcca ggaggccaga gacggtgttg ggttccctgg
      781 gactggtctc acagatggtt ctgaggcgcc atggagatgg ctgggggaac tgaactttgc
      841 tcttccagaa aaagcagcca gtgctcttag catctgagcc atttctccag ctctagtgat
      901 tatataattt tatgtgttgc taattttcag gatttttgag gctttacatt tactccttgc
      961 tgtgtttatc ttactttggg cattctcagg acgttaaaga agacgtctgt aatgatggcc
     1021 taggaaagaa aggccatttc caggaggtca tgtttttggg agaactgtaa ccatatcagc
     1081 taaaatcttg tgtgtttctg tgactgagtt caagtaagta tctgtctgct cttaaagact
     1141 cgatgggacc aaaggaatct taagataaat tatatgaaat taaaccatga aatctgcaga
     1201 gggagccaaa taagtaaaat tataaaacat ccaaagggtt gaagtcagca gtctcatagt
     1261 ctacatgcaa ggagatgtgg gtctagcagg ctattgtact ccagggtaca gcaatagctt
     1321 ttctcctgaa ggccaacaca tgggctctgt atgtaacaaa ctcaaagaat gtgataggaa
     1381 ggcagacttt tatcatttta tattgcataa aatatcatat aaatatgtaa tagaatatta
     1441 tataattcaa tggaaccctg cgagctgcag aacgagctag tgtcagccga aggccgaaac
     1501 cggaaggcgg tgctgtgcca gcgttgtggc tctcgggtgc tgcagccagg aactgctctt
     1561 ttctctcgcc ggcagctttt cctcccctcc atgaggaaga agccggatct ggtggacggc
     1621 agcaatcctg atggtgatct cctcgagaaa cactggctgg ttaatgacat gttcatcttt
     1681 gagaacgtgg gctttaccaa ggacgtgggc aacgtcaagt ttctagtctg tgcagactgt
     1741 gagattggac ccattggctg gcattgccta gatgacaaga acagcttcta tgtggccttg
     1801 gagcgagttt cccacgagta actgagggga ttgggacttg gctccaccct agctataaag
     1861 ctctgcccac aagaaccgac actgatgtgt cagcagtgct ggcagacttc ttggtactaa
     1921 tataagcacc ggtgtttgcc cttgaacttg cagagggccg gtcctgtttc ctcaggcctc
     1981 agagcatgtc tcctacttag tcctctctgt cacatgtgtc ctagagccct ttcccctgac
     2041 ttggaacatg gaagaacacg cgagtgctct accagtgtag tctggttccc tgcactctgc
     2101 ctccgcacct cgatgccaag ctctcttctt ctcagcaaga acaacattca t
//
