LOCUS       XM_039103667            2817 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus rho GTPase-activating protein 20-like
            (LOC120100814), mRNA.
ACCESSION   XM_039103667
VERSION     XM_039103667.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103667.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2817
                     /gene="LOC120100814"
                     /note="rho GTPase-activating protein 20-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:120100814"
                     /db_xref="RGD:41233265"
     CDS             193..2697
                     /gene="LOC120100814"
                     /codon_start=1
                     /product="rho GTPase-activating protein 20-like"
                     /protein_id="XP_038959595.1"
                     /db_xref="GeneID:120100814"
                     /db_xref="RGD:41233265"
                     /translation="MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKK
                     FKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFL
                     TRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIE
                     DYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQS
                     WDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKL
                     FGQDLSSICQDGKLPTIILDMLSRVKDKGPTTDGIFLLTPSGTLCKTIKEKLDNGENV
                     DIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLAVPEKVNDKEKLAAVKSLLEKLP
                     KPNADLLRQLFRILHQIKTKSSVNNMSSFILSLQTAPCILWLPSYRNNILTNDIAKKI
                     SLVSFMIDNSPELFGEDVVAVWYETSLYHPAGPKYPCSQNPPSSNGIMEETEHGLSSC
                     PGDRTCTPDFDELPRSGAAASIPYEGLLASEKGEGHEYTTQPEPVQHSPTAETKKELG
                     NCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSYWSLKEKVNTGKHVNLK
                     EESVLTVASVVMDFIQNIKGSLLSCDLYENWLSVPDEGPLLGKIAAIQNILLKMPNPN
                     YVLLKQLICVLQKIKAASTNHLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIQF
                     MIDNCQELFGENDNIFCEDSQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANT
                     KELEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD"
ORIGIN      
        1 caccgggtct cagacttcag tggttttcct gctaactgca gtcaccagtt tggtgttcaa
       61 gagtaggaag gcgaaataaa atttcaagtc tattcaaagg ttctcccttc caggctccac
      121 tgaaaagttg gagacctgta tcaggagtac tgttagtttt tattctatgt ggaaaccctt
      181 gtgaaggaag acatggggga aatacatcga accttgctct gtcaaggccc tgtggaactc
      241 acaagtggca ggaaaaggaa taaaagatat ctctccttat ttgatgatgt tttggttgtg
      301 tctactaacc tgactaagaa aaagtttaag ataaaatgta tcatcccact gaattatctg
      361 tgggtggtgg atgatgtgga acttgtcagg gcaaatcaaa cctgtacttg caagaccatc
      421 ttcttctact gggccactgg gaatgctttg gccacctttc ggtcaaaaga acagaaagtg
      481 caatggtata ctttcctcac cagatccatc aatgaagcca agaaggggat caagaaaact
      541 ttcccactgc acatattccc tgaggatatc caaacctgtg acagttcttt atgtgtaaca
      601 gcaacaaaca tggatactgt gaatgatata atggagaagt tactaccaat gataagagtg
      661 cataacattg aagattacca gctttggttc agtcctggcc acaaggaaac tccaagagca
      721 ctccaaggcc acgagtatcc atatgacatt ataatgaaca acgttcaaaa taacctcagt
      781 aaatcgaact caaaaatttt cacggctttc ccccccttgc ctgggctgtt tatggaaaac
      841 caaagctggg atacaggagg gcagttcata ttaaagccca gagactcagc tggaagccag
      901 cagcaagatg caaaggaaag acctagaaaa tcttgcatga catcatgttt ccatgggggc
      961 tctgtgcccc accatgacca agaatgcagt gacccgagag atgataagag aggaaaactt
     1021 tttgggcaag atttgagctc catttgtcag gatggcaaac tgcccaccat aattctggac
     1081 atgctgtcca gagtaaaaga taaaggacct acaacagacg gtatattttt attaactccc
     1141 agtggaacat tatgcaaaac aataaaggag aaattggaca atggggaaaa tgtggatata
     1201 tatcagcaac cagtgcatgt ggtagcctgg atcttaaagg agtttcttca atctatcaaa
     1261 ggaagtttac tgacttccaa attatatgac cagtggcttg ctgtacccga gaaggtgaat
     1321 gacaaagaga aattagcagc agtgaagagt cttctagaaa aacttccaaa acctaatgct
     1381 gatcttctca gacaactgtt tagaatacta catcaaataa aaacaaagtc ttctgtcaat
     1441 aatatgtcat cattcattct gtctcttcag acagccccat gtattttatg gcttcctagc
     1501 tacagaaata acatattgac aaatgatatc gccaaaaaga tttctctggt atcatttatg
     1561 atcgacaatt ctccagaact gtttggagag gacgttgtgg cagtttggta tgaaacatcg
     1621 ctgtaccatc ctgctggacc gaagtaccca tgttcccaga atcctccatc tagcaatggg
     1681 atcatggagg aaacggaaca tggactcagc agctgcccag gtgacaggac atgcacccct
     1741 gattttgatg aactgccgag aagtggtgca gctgcttcaa ttccatatga gggccttcta
     1801 gcctcagaga aaggtgaagg acatgagtac acaacccaac cagaacctgt tcaacattca
     1861 ccaacagcag aaaccaaaaa agaattgggg aattgttccc ccaatattct caaagacgtt
     1921 aatgtgcctg ctgtgatact tgatatgttg tccgtaattg cggaaaaagg acaatgttct
     1981 gatgacatat tcagaatgca atcggaaaaa tcatactggt cccttaagga aaaggttaac
     2041 accggaaaac atgttaactt gaaagaagaa tccgtgctca ctgtcgcttc tgtcgtaatg
     2101 gactttatcc aaaatatcaa aggcagttta ctttcttgtg atttatatga aaattggctt
     2161 agtgtcccag atgaaggacc tctccttgga aaaattgcag ccatccaaaa tatccttttg
     2221 aagatgccaa acccaaacta cgttttgctt aagcaactca tctgtgttct acaaaaaatt
     2281 aaagccgctt ctacgaacca tttagacacc tttgacttgt ctgttcgcat agcacctcat
     2341 gttttatgga atccgacttg caagacctta tttgggaggg atctctcaaa gaagttgtcc
     2401 attatacaat tcatgattga caactgtcaa gaattatttg gagaaaatga taatatattt
     2461 tgtgaagata gtcagaagtc ttatgacatc aacctatctt ctgatacatt aaatacttct
     2521 ggcaaagcaa ctcttatgat tgaaaccata gatgaccacg atgtgaagac ctcaaaggct
     2581 aatactaaag aattagagat gtcgtctgct gttcctcatg agggaggtcc tacagcaggc
     2641 cacaatggaa caacttcaaa atataatgtt ccacaagaga aaattcttca tgactgaaga
     2701 agtttccggt cattgtattt caatgttctc ttctacctcc cacaaaccat agcggaagag
     2761 attattacaa gaatcaactt cagtttaata tttaaccata ttgtttgcta taattgt
//
