LOCUS       XM_039103632            1864 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus histone H3.v1-like (LOC120100809),
            transcript variant X1, mRNA.
ACCESSION   XM_039103632
VERSION     XM_039103632.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103632.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1864
                     /gene="LOC120100809"
                     /note="histone H3.v1-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 17 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:120100809"
                     /db_xref="RGD:41163150"
     CDS             151..444
                     /gene="LOC120100809"
                     /codon_start=1
                     /product="histone H3.v1-like"
                     /protein_id="XP_038959560.1"
                     /db_xref="GeneID:120100809"
                     /db_xref="RGD:41163150"
                     /translation="MAMTAPEENYSTLFERTKLLEWCVEFYHQIPEPSWQETGLASLA
                     GAELEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAAAAAPPPPPPPPQQQQQQ"
ORIGIN      
        1 ttgaaaactt actgcctaaa atttgataaa aatctacttt tggggttgtc cagaaagctg
       61 ttgcctggga gatagctcac tggaggcagg gctctacaaa ataatctgtc tgcattcagc
      121 ctcatttgaa cacatctgtg ctgagtcata atggccatga ctgcccccga ggaaaactac
      181 tctactctct ttgaaaggac aaagttgtta gagtggtgtg tggagtttta ccaccagatc
      241 cctgagccat catggcaaga aacaggcctg gcatctttgg caggagctga gctagaagaa
      301 gaagaagaag aagaagaaga agaagaagaa gaagaagaag aagaagaaga agaagaagaa
      361 gaagaagaag aggaagaaga agcagcagca gcagcagcac caccaccacc accaccacca
      421 ccacaacaac aacaacaaca ataacaacac attgtggttc atggttcgtg tttaatatgt
      481 ggttcctggt ggcaatctat gatgatgttg atcaccatgg caataggcat cacagctgtc
      541 tacaagtagc aaatacaaag agcctatatg aaagacattt tggttcatct gaaagttgat
      601 gtgtggggca attctttggg ggtaaagatg tcactctggg tagtatgaga attacagaaa
      661 aggtgactgc tcccaagatg gattgctgct cctctaagaa ctctcggaat cagcagaaaa
      721 ccctaggctg gccttcactt tcccctaggc tccagaaatg agtgatagac agttaggatt
      781 tgggctctaa ggtgagcaca aggaagtatc atggaagaaa tagagaaaat ctcatttgct
      841 gggtaacaat gtcagggcaa gcatctgtac agcccacatc ttcaagatcc tgtagcaaat
      901 gcaaggtcac ttctctgtcc ctaagaggag tcacctaagg tgatgccaac tcaacttccc
      961 ctcaaaagaa tgtccatgtc acttactgaa ggagctggat tcatttggag tgttagtggg
     1021 aactctacag gcaaagagct gtatgggcaa agggtatgtg aataacttcc caggtatctt
     1081 ttaagtgctg gggattgaag ccagagtctt aatctgtgct aagaaagggc tctgccactg
     1141 agttatatcc caaagttctt agatatcttc tagaagcaag tatccatcac tgaccatgag
     1201 ttagagtctt tgcataaagc tagctgcttc caaccagtaa gagtgactgc actgtggcct
     1261 cctggaccaa acatatcctc accatgactc cagaacgggg tctaacaaaa atacctgcct
     1321 ctttggttct ctagttagtt tgcactgcaa aagtttccag aaccaacagc cagctggtcc
     1381 ttagagaatg gggtctccac ttccctgaat tccagatact ttcaatatta tcaccacatg
     1441 cactgtcatg atggccattg gacccagaga tgaaagtaga tgtggaaaaa gacaaagttg
     1501 ctgctgctgc tgctgctgct gctgctgctg ctgctgctgc tgctgctgct gctggtggtg
     1561 gtgtgtgtgt gtgttttgtt ttgttttatt tgcacacaca cccaaactag attgattgag
     1621 ggggcatctt gcctcagcca tagagtgaag cagacagacc catactcaca actgaggaca
     1681 gaacattacg ataacctttc ccgtcaatca gagccccaca ataacataag aaactaaaat
     1741 gtgttgagtc cattctgctt gcctgacccc aggttaagtg ttttatatta tctattttca
     1801 tactagtctg gcatggtgct attatcttac tcattaaact tttacaaagc attcctgaag
     1861 ctca
//
