LOCUS       XM_039103550            7973 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus E3 SUMO-protein ligase KIAA1586-like
            (LOC120100737), transcript variant X2, mRNA.
ACCESSION   XM_039103550
VERSION     XM_039103550.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086020) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7973
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..7973
                     /gene="LOC120100737"
                     /note="E3 SUMO-protein ligase KIAA1586-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 long SRA reads"
                     /db_xref="GeneID:120100737"
                     /db_xref="RGD:41111255"
     CDS             4883..6814
                     /gene="LOC120100737"
                     /codon_start=1
                     /product="E3 SUMO-protein ligase KIAA1586-like isoform X2"
                     /protein_id="XP_038959478.1"
                     /db_xref="GeneID:120100737"
                     /db_xref="RGD:41111255"
                     /translation="MFCVLCRKHGVMSGGSTVSFFYGTDNFRAEFLSAHHFSEAHAKA
                     SLMEATSDSPVNRAATELMVRTMSKVTLGRVENLFRSCHALVKTGHSLRDFIWMCKLD
                     DMKGVDIGPVFRTNKSARTFTYFIAEVERKNLREKLEKSNFFSVITDGTVDSLGKEAK
                     MVYVQFAHAGKVQCQIVGIQPVERKDPLTIKNAIEKTLETNLHLKLSSQDLVKKLVGF
                     GSDDYPGIEGENRVSLLLREMQPCVQSMYCFAHHLELSYREMFQTVPLYNNLEALLTD
                     IYHFYHNSPLLKSSLITAFRGLHLQPVMPSQIRGRRWFHGMQAALQNFLKGYPAIAQQ
                     LHSVGKGKDDTSQQKANRLLELILRADIIKFAHFLTDILSILSLLSHASRNRNSSIAD
                     VSASLESTLEMLQIYQSRPGPKERRVESTTHFHGNSLRGKENISTVRKAVLTHLIERL
                     RGCFRDASLDVVRATVIGSFRLWPTKMNQEFGVKEISILISHYQPVLEAASVKTDEVH
                     TEWSTLKLEIYARFQNIRKLTWDFVNSTYSHKYPNVLMLVDLVLALPASSAEPERGWS
                     QMKCTHSRMEEKIKTETMTDILTIQLNSPNISSFDPRKAIHLWNSQTQSRSAHRGPNL
                     DSPSTSESEDESDEQCDLG"
ORIGIN      
        1 ggaattgcta ctgatgggtt agaaagatga tcagaagtgc tcacagtggt catcacttgg
       61 ccagaagaca actgagttct gttggaatgc agggcagtac aaggagactt tgttctagtt
      121 tttcatgtat ttgcttggta caatattatc tgagataagc aaggagagac acagtgactc
      181 acaatcaagc agtgtagcaa gcagtatggt agtgtggcaa tggccagtcc tggtgactct
      241 tttttctgtc ttcctcctct cttggaggca tattggtaaa ttagactcta tctgacagtt
      301 gggagataat ctttatgctt ttaagtagag atgaattaag aatcccaagt ttgtgtttct
      361 gtctaaccag cggggggata ctaagcagtg aaggaatccc tcttagaact tcctgttctt
      421 tcaatgcttc atagatcttg agtagaacca aatgagttac tggtagacac ttcctaatta
      481 atttgctcac atgagtgcat aatttatttt tcatacaaat tattgaatcc cttcacattt
      541 tgtcgttaca gttctgtgcc ttccgctatc ccaccaattg ctatcctgtg tagttcaaac
      601 tgatgtgtgt gtagaatcct catctataat catcagaact gtacactcag tcaaaaagca
      661 attaagcaat gtgtctgtgg ccatgtatat tttgcactct gctaatttaa agtttgttaa
      721 tgatatgtct gaactaagtt gtttcttata aataggttta ttttacttct ccaaatgtcc
      781 taattattgg aaaatcatct cttttcccta gagataatca ataggctgta atataaatac
      841 agtatcactt tttgaaaatt agtcacaata ttttcagaaa tccatagaaa aatcattgat
      901 aacaagtgat aattcacgct atagtctata aaacttcctt gctgaggcca aagggtggca
      961 aggtgcacgt gcgtttcttt gggtgaagat atgcactgac atgcatgagc ccatcaaata
     1021 gcttgagaag tcactatccc tttaatgtgt aaaaacacaa tgtgtctatg gatagattta
     1081 ctttggcagt atttgaacag gattaatgtg ggtgccaaca ggaaccaaaa tttcaacttt
     1141 gtcaaaagac aactcacaaa tcctgttaca ttttagcaaa gaaggcttca tcctctttcc
     1201 ccttaatgga ttttacaata ttctttaaat ttttattgta ctttgtgtat gtatgagtga
     1261 cttcatgtaa tgtgtacata tatcatgcac atgactagtg cttgtggggg ctagagacag
     1321 gcatcagatg ccatggaact agggtcagag gcagttgtga gccaccttat agacactggg
     1381 gactgagtcc agatccttac gctaagtgcc atcttcccag tctctactgt tccctttaac
     1441 acatcatttc atttttgaac ttatataaat gtttattttg tcgatgttct attttatata
     1501 aaatatgggt gtaaaattct aaaataatac atgatttaaa accttcagga tgatgactga
     1561 gaggaaactg tccaattagc agcctaacaa aaagcatttg gaggcattta agtaggtgga
     1621 aggagactta aaaattataa ggctttcata attcctttca aaagagatcc cagtattcat
     1681 ggtgaatatt ttaatacatt cttcaatata tactcaaatt cggagattac attccagctt
     1741 agagtctaaa attaaatagc acatggcttt agttaatcaa catttgaact agaaatattg
     1801 gaatagaagt atgtccagat ataatttttc ctgaatataa gaaagttgta tcattgtcag
     1861 acaattatga aacttgagag agatgtcttg gttactgttc cattgctgtg agcagacacc
     1921 atagcaacac ttaaaacaga aagcattaaa ttggggctgg cttacagttt cagagattta
     1981 gttcattacc atcctgttag ggaacatggc agcatgcagt tagacatgat gctagagaag
     2041 tatctaagag ttttatatct ggatccacag gcattaggaa cagagggaca ctgggcttga
     2101 cttgggctca aagcacatcc ccaatggcat acttccttta ataaggctac acctcctaat
     2161 ccttctcaag tagggtcatt ccctgatgac taagcattca catatatgat attacagtgc
     2221 catttttatt caaacaacta caagaaaatc agcaggtaag gaagaatgta agtaatagct
     2281 aaaacatttt aaaatcataa ttgaaagaaa ataatttgct gtgggaaagc ttagaatgtg
     2341 acttgaaaag tataatacta agcgatgggt taattttgag acagaatatg aaatttagga
     2401 aagggcccac gagtgaaaaa taaaggagat tggttgtgca gtgatcaagg ctggtccaga
     2461 aaagaaaata ttagcaaatc tacagaagcc tggagtgatt tggtgacaag gatacagggg
     2521 gtacttacat gaaaaataac atgctttaga aaatgtagag caaagcatag aggagggcag
     2581 aggttgaggg aatggtgagg agactggcct gcatttcctt ctccagttgt acgaactgca
     2641 ggaaaataga tgacaggtat ttatcagagg agtaccccca gccccagcat actcagctaa
     2701 cccatacatg gataactgct gtcatttaga tagaaggttc agaggtgtat atgagatgta
     2761 aggtttttga tgattcaaag ttagttctgg tctgactttg accatagtgt ggacaaacaa
     2821 cactccactg aaaaaggata tgtattctgt gtgtttactc ttagatgtat gctaaacaca
     2881 ttgttgtctc attggctgag gtaaagtttg ttgtcattgc ttttgctttt gcttcaaaga
     2941 gaaggaaaat gtattatcca ttccattttc tgcatttcag cggtaacagc acagcatttt
     3001 ttactatcac caggagtcag gctacaaatg ctgacagtgc tcactctgag ctacaccaag
     3061 aacttggctt gacttctgtt catctcggct aaacccataa attaccaagg atttataatc
     3121 ttaggtgtcc tgacccaccg ttgttttaca ctactttaaa tattacttac ataatcatat
     3181 ttatttttgc tatttgtgga gcattggctt tccttatttt ttttgtattt tttcattttt
     3241 tctatgacaa acacctgcct tttaaaaact aattgcagca ttatgtccat tcataagtgt
     3301 ttacccattt taaaagtaca agttgttgat gcggactggc cacaccaatg taggaagctc
     3361 agatcactca ggttttgtgc tcacaagtaa ctgcttccac cttctccctc caggataact
     3421 ccaggtgata gctatcctaa tagcagttaa tgactttatg aagtctcaca tgcagaatgt
     3481 tctcatctgg ttccttcatt acataaatac atgaaataat ttgacatgaa aaagaatcaa
     3541 tttttgatat gcccccattt gctcactact attattgaga ctgattcata ttttatacag
     3601 attggtattt aagttatagg tttattccat tgtggaaagt ggtttactac aacgtatata
     3661 catgttccat cgttaatggc atggtttcgg tctcattttt ttaactgatg cataactgtt
     3721 catatttctg gggaagtgtg acatttgata tatgtccaaa ctgtatagtg aacaaatcaa
     3781 gacaatttag catcatgtca ctttaaacat tatttcctag tcatctattc atcttttaaa
     3841 tgaagatttg tattcactta aattttttaa aatattttac taactttaat cttcataata
     3901 atttttaaag taccattaat ttaatgttac aaaggaaggg atgaggcaga gagagattaa
     3961 acaagttgcc caagagtgtg ggacaatcat ttgacaagaa atagacttgg aaaataactg
     4021 tctgactcca attatccaat caaagttgaa gtagataagt caatcaacat gcaaaaacaa
     4081 attccaatat aggacataac aaatgaagac tacacaaaat tagcaattgt tataatttag
     4141 aaaacactcc ttcttctgtt gtaggaaaaa attcattagt aattcctgtt acatcactgg
     4201 taagaggggc tttctaattc tctggatgtt tactcacgct gcttctacga ttccaacata
     4261 aaaatggatt gttgctgagt gtgggagaaa ggcaagcata ttggaagagt cagaggactg
     4321 ggagaactgc tgggaaatag tgttttctgg ataggacagg gaggctgcac ccatgaacta
     4381 tcaatggtat gattatctaa acatggcctg tagaagacca cgccagtcaa taccatagca
     4441 tagatgagag aaaggctcac aagtctcccc taacccagct gagatctaca accagactgg
     4501 ggctactgaa aattaaagcc tgttttcttt agaacaagct ccctgctagg taagcagccc
     4561 atacaaaaat gattagccct atactcatta cacttatcat atttatatat gacatatgtc
     4621 ttcttatgta tattatatga gaagattaca tgtaattaag aggtggatgt agatgggcag
     4681 agacatgacg agaggagttc ttaaataacc ctatggagtt ttctttaaag gcaaagactt
     4741 tccagatgct gtgatttcag tcaccaaaaa gcagaaaaag tcacgaaaag ttgactccta
     4801 cctaccggaa agaaatcatc agtttttgaa aatttggctt aaaaaatacc cgtggcttgt
     4861 gtatgatgaa ctattaaacc ttatgttctg tgtcctgtgt cgtaagcatg gggtaatgtc
     4921 aggggggagt acagtaagtt ttttctatgg cacggacaac tttagagctg aatttctcag
     4981 tgctcatcac tttagtgaag cccacgccaa ggcatcactc atggaagcaa ctagtgattc
     5041 tccagtgaac cgagctgcca ctgaactgat ggtaagaacc atgagcaaag tgactctggg
     5101 aagagtggag aacttattta gatcatgcca tgccctagta aagaccggac attccctcag
     5161 agattttatt tggatgtgta agttggatga tatgaagggt gttgatattg gcccagtctt
     5221 cagaactaac aaatcagcaa gaacatttac atatttcatt gctgaagtag agaggaaaaa
     5281 cctaagagaa aaactagaaa aaagtaactt tttctctgtc atcactgatg ggactgtaga
     5341 cagtctaggc aaggaagcca aaatggttta tgttcaattt gcacatgcag gaaaagtgca
     5401 atgccagatt gttgggatac agccagtaga acgaaaggac cctttaacga taaaaaatgc
     5461 tattgagaaa actctagaga caaatcttca tcttaagctg tcaagccaag acttggtgaa
     5521 gaagctggtt ggttttggaa gcgatgatta ccctggaata gagggagaga acagagtatc
     5581 tctgcttttg agagaaatgc agccatgtgt gcaaagtatg tattgctttg cacatcatct
     5641 agaactgtct tacagagaga tgttccagac tgtccctctc tacaacaacc ttgaggcact
     5701 cctcaccgat atttaccatt tctatcacaa ctctcctctc ctcaagagtt ctctgataac
     5761 tgccttcagg ggcctccacc tccaacctgt gatgccttct caaataagag ggaggcggtg
     5821 gtttcatgga atgcaagcag ccctccagaa ctttctcaaa ggatacccag caattgccca
     5881 gcaactgcat tcagtaggca aaggcaaaga cgataccagt caacagaaag ccaacagact
     5941 tctagaactc attctccgag cagacatcat caagtttgct cacttcctga cagacatcct
     6001 tagtatcctt agccttctgt cccatgccag taggaacaga aattcttcca ttgccgatgt
     6061 atctgcttcc ttggagtcaa cactggaaat gctccagata tatcaatcaa gaccagggcc
     6121 aaaagaacgc agggtggaat caaccacaca ctttcacggt aacagcctca gggggaaaga
     6181 aaacatttcg accgtgagaa aggcggtttt aacacatctt attgagagat tgcgaggctg
     6241 ttttagagat gccagccttg atgtggtgag agcaactgtg attggaagct ttagactgtg
     6301 gcctacaaag atgaatcaag aatttggagt aaaagagata tccatcctga tttcacatta
     6361 ccaaccagtt ctagaagctg ccagtgtgaa aactgatgag gtacataccg aatggagcac
     6421 attaaaatta gaaatatatg ccaggtttca gaacattcga aagctgacct gggattttgt
     6481 aaactccact tattcacata agtatccgaa tgttctgatg cttgttgact tggtgctggc
     6541 cctccctgcc agctcggcag aaccagaacg cgggtggagt cagatgaaat gcacccactc
     6601 acgcatggag gagaaaatca agactgaaac catgacagac atcctaacca ttcagctgaa
     6661 ctctccaaac attagcagtt ttgaccctag gaaagctatt catttatgga attcgcagac
     6721 acaatctcgg agcgctcaca ggggaccgaa tcttgacagc ccatcaacat cagagagcga
     6781 agacgaaagc gacgagcagt gcgacttagg ttgactttgt tacacatggc agcaaaaata
     6841 aattaactca agaacaatcg aagtcgcagc cagtctttgc ctcaaacaca aaagacactt
     6901 ggcattttcc aaacatgcaa agagacacaa agcaaaaaga aaaaaaaaag aaaaaagaaa
     6961 agaaaaagaa aacaaatcca gggtcatttc ctgtgcttat gtgtttaatg cttttgcttc
     7021 aggacgtcgg tgaggctggt gcttctaggc agtatttcaa tggcatcttt ccgtgtgttt
     7081 tctctaaggg cgagcacact gctgatcgtg gttatctaga cttgccataa agccaactcc
     7141 tgttcccaga ccattcttaa ctctagttgc agtgggtagc taacagggct aaactgatag
     7201 aaagtctttt aattaatctt tggaaaactt tatctttgaa actgtcatcc tgtggaatct
     7261 gaaagtcata tgcctaaatg cctatgacat cgaatgacaa ggtcaaacat taaaatgttt
     7321 tccacatttc acactatggt ctccatataa acaattccta gggtacactg aagatgctgt
     7381 tttgcagcat tttgcttcct aatgtagcca ttagagagca ggagaacata tcttacaatc
     7441 accagaattt gcaagtgctt tgttactctt tgcagtttta gtagattttg tttgtggtcc
     7501 tatcttgaat aacatcgctg atttacgtct tatatctgaa acccagtgtg gtctcactta
     7561 aacctttatt taaaggggca ttttttaccc ctggaattgt tctcctgact aataccaaat
     7621 acttcaggaa aattaaaatg acacaaaatt catcatggaa ttacctgtcg gtggttcatt
     7681 atatcaagag aataagagtg aactactact actcaaaccg ctaccttaca aacatgggat
     7741 tgtacatgtg cttttaacca ctgacatttt aaagtgatag ctgcatttct ctaaagatta
     7801 gaataaacca taaggttcat gtggactctc aggtacagtg aaaactcaga tgcaaatgga
     7861 aactttagga atctatgtcg aataaaaaag aacaactaaa agaaagaaca gctctctgcc
     7921 gtgcacctcc cagatacaag gatatataga actggtctcc cgtaactcta aaa
//
