LOCUS       XM_039103350            1582 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus pancreatic alpha-amylase-like
            (LOC120100610), mRNA.
ACCESSION   XM_039103350
VERSION     XM_039103350.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103350.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1582
                     /gene="LOC120100610"
                     /note="pancreatic alpha-amylase-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     ESTs, 49 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:120100610"
                     /db_xref="RGD:41125922"
     CDS             22..1548
                     /gene="LOC120100610"
                     /codon_start=1
                     /product="pancreatic alpha-amylase-like"
                     /protein_id="XP_038959278.1"
                     /db_xref="GeneID:120100610"
                     /db_xref="RGD:41125922"
                     /translation="MKFVLLLSLIGFCWAQYDPHTADGRTAIVHLFEWRWADIAKECE
                     RYLAPKGFAGVQVSPPNENIIINNPSRPWWERYQPISYKICSRSGNENEFKDMVTRCN
                     NVGVRIYVDAVINHMCGSGNSAGTHSTCGSYFNPNNREFSAVPYSAWDFNDNKCNGEI
                     NNYNDANQVRNCRLSGLLDLALDKDYVRTKVADYMNHLIDIGVAGFRLDAAKHMWPGD
                     IKAVLDKLHNLNTKWFSQGSRPFIFQEVIDLGGEAIKGSEYFGNGRVTEFKFGAKLGT
                     VIRKWNGEKMSYLKNWGEGWGFVPTDRALVFVDNHDNQRGHGAGGASILTFWDARMYK
                     MAVGFMLAHPYGFTRVMSSYRWTRNFQNGKDVNDWIGPPNNNGVTKEVTINPDTTCGN
                     DWVCEHRWRQIRNMVAFRNVVNGQPFANWWDNGSNQVAFSRGNRGFIVFNNDDWALSS
                     TLQTGLPAGTYCDVISGDKVNGNCTGLKVNVGSDGKAHFSISNSAEDPFIAIHADSKL
                     "
ORIGIN      
        1 cactgacaac ttcaaagcaa aatgaagttc gttctgctgc tttccctcat tgggttctgc
       61 tgggctcaat atgacccaca cactgcggat gggaggactg ctattgtcca cctgttcgag
      121 tggcgctggg ctgatattgc caaggaatgt gagcggtact tagcacctaa gggatttgca
      181 ggggtgcagg tctctccacc caatgaaaat attataatta ataatccatc aaggccttgg
      241 tgggaaagat atcaaccaat cagctacaaa atttgctcaa ggtctggaaa tgaaaatgaa
      301 ttcaaagaca tggtgacgag gtgcaacaat gttggtgtcc ggatttatgt ggatgctgtc
      361 attaatcaca tgtgtggctc gggcaatagt gcaggaacac acagtacctg tggaagttac
      421 ttcaatccta ataacaggga attctcagca gttccatact ctgcttggga ttttaacgat
      481 aataaatgta atggagaaat taataactac aatgatgcca atcaggtcag aaattgtcgt
      541 ctgtctggcc ttctggatct tgcacttgat aaagattatg ttcgtaccaa ggtggctgac
      601 tatatgaacc atctcattga cattggtgta gcagggttca gacttgatgc tgctaagcac
      661 atgtggcctg gagacataaa ggcagttttg gacaaactac ataatctaaa tacaaaatgg
      721 ttctcccaag gaagcagacc tttcattttc caagaggtca ttgatcttgg tggtgaggca
      781 attaaaggta gtgagtactt tggaaatggt cgcgtgacag aattcaagtt tggtgcaaaa
      841 cttggcacag ttatccgcaa gtggaatgga gagaagatgt cttatttaaa gaactgggga
      901 gaaggttggg gttttgtgcc tactgacaga gcccttgtgt ttgtggacaa ccatgacaat
      961 cagcgaggac atggtgctgg aggagcatcc atcctgacat tctgggatgc tagaatgtat
     1021 aaaatggcag ttggatttat gttggctcat ccttatggat tcaccagagt aatgtcaagt
     1081 taccgatgga caagaaattt ccagaatgga aaagatgtga atgactggat tggaccacct
     1141 aataacaatg gagtaacaaa agaagtgacc attaatccag acactacttg tggcaatgac
     1201 tgggtctgtg aacatcgatg gcgtcaaatc aggaacatgg ttgccttcag gaatgtagtc
     1261 aacggtcagc cttttgcaaa ctggtgggat aatggcagca accaagtggc ttttagcaga
     1321 ggaaacagag gattcattgt ctttaacaat gatgactggg ctttgtcaag cactctacag
     1381 actggtcttc ctgctggcac atactgtgat gtcatttcag gagataaagt caatggcaat
     1441 tgcactggac ttaaagtaaa tgttggcagt gatggcaaag ctcacttctc tattagtaac
     1501 tctgctgaag acccattcat tgcaatccat gccgactcaa agttgtaaga gtcaaattaa
     1561 agagatttag attcagcacc aa
//
