LOCUS       XM_039103342            1458 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus TD and POZ domain-containing protein
            1-like (LOC120100601), mRNA.
ACCESSION   XM_039103342
VERSION     XM_039103342.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103342.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1458
                     /gene="LOC120100601"
                     /note="TD and POZ domain-containing protein 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120100601"
                     /db_xref="RGD:41216684"
     CDS             26..1105
                     /gene="LOC120100601"
                     /codon_start=1
                     /product="TD and POZ domain-containing protein 1-like"
                     /protein_id="XP_038959270.1"
                     /db_xref="GeneID:120100601"
                     /db_xref="RGD:41216684"
                     /translation="MSRDLKFKSCGYTHSSVQKFCYEWTISNFSFCMDGILENITSPV
                     FSLEANEEEMQWCLRIHPNGIDEESKDYLSVYLWLLSCPESPVWATFQFWIINAQGEK
                     YQIIKVPNVLKFLPNQKWGHKKFILRDFLLFYRHWLLPEDQLTLCCKVCIVGPVFSRP
                     GQNMTPAIRDPRQMLADDLGELWENPLFTDCTLVVAGQEFRDHKAILAAHSPGFRAMF
                     EHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHIHSMATGLLAVADMYDLQDL
                     KVMCEDALCRNLSVKNAVPTLILADLHNADHLKTKAMDFIILHASEFSETLGWKSMVE
                     SYPHLVEEAFHSLSSIQCPFFVALT"
ORIGIN      
        1 aacctccaaa ctacctccag aagacatgtc aagggacctg aaattcaaga gctgtggcta
       61 cacacatagc agtgttcaga agttctgcta cgagtggacc attagcaact tttcattttg
      121 catggatgga attttggaaa atattacaag cccagtgttc tcattagagg ccaatgaaga
      181 agaaatgcaa tggtgtttga ggatacatcc aaatggtatt gatgaagaaa gcaaggatta
      241 cctgtcagtt tacctgtggt tgctcagttg tccagagagt ccagtttggg caacgttcca
      301 gttctggatt ataaatgccc aaggagagaa atatcaaatt ataaaggtcc caaatgtttt
      361 aaagtttcta ccaaaccaaa aatgggggca caaaaagttc atccttcgag atttcctcct
      421 cttttatagg cactggcttc tccctgaaga ccagctcacc ctgtgctgca aggtgtgcat
      481 agtaggaccc gtctttagca ggcctggaca gaacatgaca cctgcaatca gggatccaag
      541 acagatgttg gcagatgacc taggggagct gtgggagaat cccctcttta cagactgcac
      601 cctggtggtt gctggccagg aattcagaga tcacaaggcc atcctagcag ctcactctcc
      661 aggttttaga gcaatgtttg aacatgaaat gctggagagc ctaacaaatc gcattgagat
      721 ccatgacatt cacctgcaag tctttaagga aatgatggcc ttcatttaca cagggaaggc
      781 accacacctc cacatccatt caatggccac tggtttgttg gcagttgctg acatgtatga
      841 cctgcaggac ttgaaggtca tgtgtgagga tgccctgtgc aggaacctct ctgtgaaaaa
      901 tgctgtaccc actctcatcc tggctgacct ccacaacgca gaccacctga agactaaggc
      961 catggatttc attatacttc atgcttctga attctctgag accctggggt ggaagtcaat
     1021 ggtggagtca tatccccact tggtggagga agcatttcac tccctgtctt ccatacagtg
     1081 tccttttttt gtagccctca cttaaacacc gtaagatatt ttaggtgctt gattgctatg
     1141 acctacatct gtcttccaaa agtagcaatc agtgtttttt gcaaatgact tctgtttaga
     1201 ctactctatt gctggaacat ttacagtgaa tctggggaaa ggcagcctgg tggcccaaga
     1261 tttaaaacag ctgtaatgta atgtcaaaat ggtgtgtggg gaaagagcag ctctagggtc
     1321 ttggacactc tacctggcaa ctcccctgtt gatggtgttt gattcttgtc tgatgtcttg
     1381 taaactggga ttcaactgtc ctgaccaccc aacatacttt ctttggagaa acctgtctgc
     1441 attggactga gcagaata
//
