LOCUS       XM_039103339            1254 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus TD and POZ domain-containing protein
            2-like (LOC120100594), mRNA.
ACCESSION   XM_039103339
VERSION     XM_039103339.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103339.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1254
                     /gene="LOC120100594"
                     /note="TD and POZ domain-containing protein 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 Proteins, and 25% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120100594"
                     /db_xref="RGD:40949447"
     CDS             1..1095
                     /gene="LOC120100594"
                     /codon_start=1
                     /product="TD and POZ domain-containing protein 2-like"
                     /protein_id="XP_038959267.1"
                     /db_xref="GeneID:120100594"
                     /db_xref="RGD:40949447"
                     /translation="MSGDLEAKICSYTHISVQRFCYKWTISNFSFCMDGIRENITSPV
                     FSLEGNEEVQWCLRIFPNGVDEESKDYLSVSVGLHSCQKSPVLAKVQVWIINAQGEKH
                     QIKEIPNILSFSPKQQWGLSKFVLRDFLLSLRHWLLPEDQLILCCKVSIVGPSFSTPG
                     HNMTPANKDPRQKLADDIGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMIE
                     HEMLESLTNQVEIHDIHRQVFKEMMAFIYTGKAPHLHSHSMATDLLAAADMYDLQDLK
                     VMCEDSLCSNLSVKNAIPTLILAALLSTVHLKTRVMDFIILHASEVSKTLEWKSMVES
                     HPHLVEEAFLSLASIQCFSSETSLKHLKIF"
ORIGIN      
        1 atgtcagggg acctggaagc caagatctgt agctacacac atatcagtgt tcagagattc
       61 tgctacaagt ggaccattag caacttttca ttttgcatgg atggaattcg ggaaaatatt
      121 acaagcccag tgttctcatt agagggcaat gaagaagtgc aatggtgttt gagaatattc
      181 ccaaatggtg ttgatgaaga aagcaaagat tacctgtctg tttccgtggg tttgcacagt
      241 tgtcaaaaga gcccagtttt ggcaaaggtg caggtctgga tcataaatgc ccaaggagag
      301 aaacatcaaa tcaaagagat cccaaatatt ttaagcttta gtccaaaaca acaatgggga
      361 ttgagtaagt tcgtccttcg agatttcctc ctctccctta ggcattggct tctccctgaa
      421 gaccagctca tcctgtgttg taaggtgtcc atagtaggac cctcctttag cacgcctgga
      481 cataacatga cacctgcaaa caaggatcca aggcagaagt tggcggatga cataggagag
      541 ctgtgggaaa attccctctt cacagactgc agccttgtgg tagctggcca ggaattcaga
      601 gctcacaagg ccattctagc agctcgatct ccagttttca gagccatgat tgaacatgaa
      661 atgctggaga gcctaacaaa ccaggttgag atccatgaca ttcatcggca agtctttaag
      721 gaaatgatgg ccttcattta cacagggaag gcaccacacc tccacagcca ctcaatggcc
      781 actgatttgt tggcagctgc tgacatgtat gacctgcagg acttgaaggt catgtgtgag
      841 gattccctgt gcagtaacct ctctgtgaag aatgctatac caactctgat cctggctgcc
      901 ctcctcagca cagtgcacct gaagactagg gtcatggatt tcattatact tcatgcttct
      961 gaagtctcta agaccttgga gtggaagtca atggtggagt cacatcccca cttggtggag
     1021 gaagcatttc tctccctggc ttctatacag tgtttttcct cggagacttc actcaaacac
     1081 ctaaagatat tttaggagct tgacagatat gaccgacacc tggcttctaa cagctacaac
     1141 tagtgttttt aacaatgact tctgtttaga ttacagtttt gctggaacat ttacagtgaa
     1201 tctggggcaa ggtagcatga tggctatgga tttcatacag ctgtaatatt tcaa
//
