LOCUS       XM_039103334             543 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus late cornified envelope protein
            3D-like (LOC120100588), mRNA.
ACCESSION   XM_039103334
VERSION     XM_039103334.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103334.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..543
                     /gene="LOC120100588"
                     /note="late cornified envelope protein 3D-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins, and 61% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120100588"
                     /db_xref="RGD:41326222"
     CDS             1..297
                     /gene="LOC120100588"
                     /codon_start=1
                     /product="late cornified envelope protein 3D-like"
                     /protein_id="XP_038959262.1"
                     /db_xref="GeneID:120100588"
                     /db_xref="RGD:41326222"
                     /translation="MSCQQSQKQCQPPPKCPSPKCSPKCPPKSTAQCLPAASSCCATS
                     SGGCSVPSSEGGCCLSHHRHRSHRCRRRSSSSCDRGSGQQSGGSGCGHTSGGCC"
ORIGIN      
        1 atgtcctgcc agcagagcca gaagcagtgc cagcctcctc ccaagtgccc ctccccgaag
       61 tgctccccaa agtgcccccc aaagagcaca gcacagtgtc tgcctgcagc ttcttcctgc
      121 tgtgctacaa gctctggggg ctgcagtgtt cccagctctg agggaggctg ctgcctgagc
      181 caccacaggc acaggtccca cagatgcagg cgcaggagct ccagttcctg tgaccgtggc
      241 agtggtcagc agtctggggg ctcaggctgt ggtcacacct ctgggggctg ctgctaacct
      301 ggagcatgat gctgagacat gagagtctgg aggaaagaca tatcccaggg gtcaaggaga
      361 gcccagccag tcttgtcttc tctgatcctg gagagcattg tctgcttgta tgatgtccag
      421 gtccctcgtt cccgcccttc ctgtggagtc ccattgccta tccctgattt tgaccaagaa
      481 taaaccttct gttcccatca cattggtatt taactgtcat tattccctgt ccctccaaag
      541 gtg
//
