LOCUS       XM_039103327            1807 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus late cornified envelope protein
            1C-like (LOC120100586), mRNA.
ACCESSION   XM_039103327
VERSION     XM_039103327.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1807
                     /gene="LOC120100586"
                     /note="late cornified envelope protein 1C-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120100586"
                     /db_xref="RGD:41001067"
     CDS             1189..1611
                     /gene="LOC120100586"
                     /codon_start=1
                     /product="late cornified envelope protein 1C-like"
                     /protein_id="XP_038959255.1"
                     /db_xref="GeneID:120100586"
                     /db_xref="RGD:41001067"
                     /translation="MSCQQNQQQCQPPPKCTPKCPPKCQTPKCPPKCPPKCPPKCPPV
                     SSCCSLGSGGCCGSSSGGCCGSSSGGCCSSGGGGCCLSHHRPRRSFHRHRHSSGCCSS
                     GGSSGCCGSSGGCCGSSGGSSGCCGSSCGGSQQSGDCC"
ORIGIN      
        1 aggcagggcc tctcatgccc aatcactgtc tcacagactt gggcagagcc caggatcaga
       61 ataaaagggc cgaaggacag agcacctcca ttcatttacc ttctgaggta tctacagatc
      121 ttctgtgcct gtaacctcgg taagtgccca ttgggattgg gaaaatggcc tatacagagg
      181 gaagttaaga ggagaggtgg caagtcaaaa tgagctgggt aaagccactg agctgagtca
      241 tgctagcaga gcagagagca aggggtgggg ggtgatgaag gctgggtagg agtggttgag
      301 tcaaagggac tctaaaactc ctgggaggta ttagaaggaa ctaggttcct ctgacttcag
      361 aatctgagtg gatattctgc cctcctgtgg agtgggtgct caggatggaa acctgaaata
      421 cagagagctg aggagctagg taggcttcag gagggggagc tcccttttgt aacacctcct
      481 tgggatagcc tgcaaagcaa gactaacagg gaggacaggg caccaaaggg atctttgggc
      541 ttggaaatca cagcgccatg gatctggaat ttgatcacag ctgctcagaa tttttaagac
      601 actgagcaca agaattacta tgtcaaacac cagtcaaggt agggtgttca catgagttta
      661 gacttgcctg aaacaaggaa ccagacctgg ttgatggctt caggaatgga taagtctttt
      721 attaaatgga gtgtgaacac tgatcaataa tctttatttc cttctctgat gtcagtatcc
      781 tcatcggttt tggaagtggc aggaatccat ggaactgtcc taagaattac catgatatac
      841 aatgactgta gaccaagcac agtggcattg tcattcagag aaattaatgg atgaggaaat
      901 tatacggatt atgactccag actatgaaat ctctaaactt aggggttgtt actggaggaa
      961 ggttcctctg aagaataaga atctcctttt ccctgtcaaa ttttgcaaga caatttgatt
     1021 ctactgacca gtactgaaga aagctttggg atatgttaga aataaaacta cttttatgga
     1081 ctttctatga tgatcagtga tgtttagagg tggataggat agccccagga tcctggttct
     1141 aacttgcact gtgattctcc cacagcacca gagcactcac catctgagat gtcctgccag
     1201 cagaaccagc agcagtgcca gccccctccc aagtgcaccc ccaagtgccc tcccaagtgc
     1261 cagacaccaa agtgccctcc aaaatgcccc cctaaatgtc ctcccaagtg cccccctgtg
     1321 tcttcctgct gtagcctggg ttctgggggc tgctgtggct ccagctctgg gggctgctgt
     1381 ggctccagct ctggtggctg ctgcagctct gggggtggag gctgctgcct gagccaccac
     1441 agaccccgca gatctttcca tcgccatcgc cacagctctg gatgctgtag cagtggtggc
     1501 agcagtggct gctgtggcag cagtggaggc tgctgtggca gcagtggtgg cagcagtggc
     1561 tgctgtggca gcagctgtgg tggtagccag cagtctgggg attgctgctg acctgagcaa
     1621 ctaacacatt agataagcca ttcaggagga agccatgttc agaagacctt ccctggcttg
     1681 ttctactctc ctgctgccct ctgtgtcttg ggctctacaa tgctgtaatc ctgtgagatg
     1741 ttttgaatgt gctcttttaa agggtctgtc ttcttgtgga caaaataata aagtgcttcc
     1801 ctaacaa
//
