LOCUS       XM_039103286             625 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 60S ribosomal protein L17-like
            (LOC120100542), mRNA.
ACCESSION   XM_039103286
VERSION     XM_039103286.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103286.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..625
                     /gene="LOC120100542"
                     /note="60S ribosomal protein L17-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 long SRA reads, 50 Proteins, and 94% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120100542"
                     /db_xref="RGD:41272999"
     CDS             29..598
                     /gene="LOC120100542"
                     /codon_start=1
                     /product="60S ribosomal protein L17-like"
                     /protein_id="XP_038959214.1"
                     /db_xref="GeneID:120100542"
                     /db_xref="RGD:41272999"
                     /translation="MVRYSLDPENPTKSCKSRGSNLRVHFKNTQETAQAIKGMHIRKA
                     TKYLKDVTLKKQCVPFRRYNGGIGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNA
                     ELKGLDVDSLVIEHIQVNKAPKMRIRTYRAHGWINPYMSSICHIKMMLTEEEQIVPKP
                     EEEVAQKKKVSQKKLKKQKLMAREKIQHK"
ORIGIN      
        1 tgtaatcggc cagaggtgac ctgtgaagat ggttcgctac tccctagacc cagaaaaccc
       61 cacgaaatca tgcaagtcaa gaggctcaaa ccttcgtgtt cactttaaga acacccagga
      121 aactgcccag gccatcaagg gtatgcatat ccgcaaagcc accaagtatc tgaaggatgt
      181 cactttaaag aagcagtgtg tgccattccg gcggtataat ggtggaattg gtaggtgcgc
      241 ccaggccaaa cagtggggct ggacacaggg acggtggcca aaaaagagtg ctgaattttt
      301 gctgcacatg cttaaaaatg cagagagtaa tgctgaactt aagggtttgg atgtagattc
      361 tctggtcatt gaacacatcc aggtgaacaa ggctcctaag atgcgcatac gaacctacag
      421 agctcacggc tggattaacc catacatgag ctccatctgc cacatcaaga tgatgctcac
      481 tgaggaggaa cagattgttc caaagccaga agaggaggtt gcacagaaga aaaaggtttc
      541 ccagaagaaa ctgaagaaac aaaagctcat ggcacgggaa aaaattcagc ataaataaat
      601 gcagataaag taaaaaaaaa aaaaa
//
