LOCUS       XM_039101517            4036 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus sperm motility kinase 3A-like
            (LOC120100105), transcript variant X2, mRNA.
ACCESSION   XM_039101517
VERSION     XM_039101517.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101517.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4036
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4036
                     /gene="LOC120100105"
                     /note="sperm motility kinase 3A-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 5 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:120100105"
                     /db_xref="RGD:41303130"
     CDS             2121..3626
                     /gene="LOC120100105"
                     /codon_start=1
                     /product="sperm motility kinase 3A-like"
                     /protein_id="XP_038957445.1"
                     /db_xref="GeneID:120100105"
                     /db_xref="RGD:41303130"
                     /translation="MSFGSKRESERLRSQGSSCTESFCSQYLVLNTIGHGFHAAVKLA
                     VHRLTGTPVAVKMILKRQQWCQQVTSEVEIMMRINHPNIVSLIQVIDTEKITYLIMEL
                     AKGNQLYSHIKEAGHLQEDEARGIFRQLLSAVGYCHEEGIIHRDLKPDNLLVDTKGRI
                     KIIDFGSATQVRPGQKLRKPYGTYAFSAPELLLGKFYEGPKVDVWALGVILYYMTVGK
                     VPFEAASIPLLRRQIVLGTYVVPPGLSEELQDLLSLLLKVNSQQRPTIPDLLTHPWLK
                     IDSEGFPQPCKELIPLRPDPAILRAMQDIGFEAQEVKDSLDQKKFNQSMACYYLLEKQ
                     ALQECDNPTRPHPCMTPFPTLDYPATSVRGLRSRGSEPRWLGSSSDSQGSDLGQTPSH
                     RLVKRASWPGGLLCRPRQIAPTVELTHRISISDPCFSSVHSRGKKTINTESTEDKSSD
                     SAEVKPVASRPWPKRFRGWVKNIRNGLMNLCCCIPSRKKPPLGHNRVVPQK"
ORIGIN      
        1 cacagtcatt tctgggtaca gagagctttg ggactggctc agctctggtt ggaggcagga
       61 actgaaaggg ttctatccca gactgctcct gggttggtgt gtcctgaggg cttcaggcag
      121 gacccttgga gcagaactga tggtcttaga actgctctct agtgtgtctt cgccccttgt
      181 gaatggcttt caattcttgc acagggagag actgcctgac tgctcctagg atcctgggtg
      241 cacggggctc taggcaggtt cctcttctgc caggaacgtg aggagaattg gtggcctccc
      301 ccatgctccc agaattctcc tcacttctga gagtccagct gtctccccca tgggatttgg
      361 gtacctctca taggattctt tatgcatggg agttttggtt attgctgttt ttactctaac
      421 tggggatttg agtttgtgat tatttgtggt ttttaaatgt tatataaatt cttggagaat
      481 ttcatacttt cattgaatgt atttggatcc tcttcactcc ctgcatcctt caccaactcc
      541 tcccacatcc atcttcacag tcacctgcca caacccacaa attcatggtt ttttaataac
      601 ctggtgtcct gtgttcctga gtgtggggaa tgactctctt ccctatgtgt cgtcaactgt
      661 caatgttccc actctgggtt agtcatgcag gactgcttga ttttgtggag atctgatgca
      721 ggcagtcaca gctgttggga gtttatgaat gaggtggtct tgtgttgaga agatattttg
      781 atacgtctct tcccaacccc aggatcttac aatttctctg cccttgtttt ccattatagt
      841 ccctgagcca tggagggagg gagggaggga atgtggacac accccccaca cctgtttcgc
      901 ctgagcactt tgtcaacagg tattctccag tcttttagca gctatgagtt tctgtgcaat
      961 tgcaccaaga aatttctctg agatatgaga gttgtactat taaatctgaa gacttcttgc
     1021 aaggatgtgc atatgagtaa gaacatgctg tgtttgttat tttgagtctg ggtgagctca
     1081 cttagtgtaa ccttgtctag ctccaagcat ttagttggaa acttgataat ttcagtttct
     1141 tttacatctg aatgacattc cactgtgtgt aggtaccaca ctcgcattag tcattcatca
     1201 gctggacgga taccttggct gtctacattc cctgcaccgt gaacaaatga aacagtagtg
     1261 aacatggatg aacaagtgtc tttgcagcag gaaatattgt tccttgagta tatcccagga
     1321 atggcgtagc tgtatcaggt ggaacaccta tttctagttt tctgaggaac acccacactc
     1381 tacagtggcc acctcagttt atatcttccc acggacactg tgcatgaggg tctccatccc
     1441 ccacatgcac cccagcattg ttgcctttgc cattctgatt agaataagat gaagtctcaa
     1501 actagtttta gttttcatct ccctaatggc ccaagatggt gaacatatac atatatattt
     1561 cttagccata cattccttag ccatgcatga cttgtgagaa aaaccctttg aagaccccta
     1621 tctcaattaa tcccaattgt tcactgggac gtttccttag agttgtctct ttaatacttt
     1681 ctatattcta ggagttttga tgagtgcgtt ctattttgtt ttaatctcta ggtttttagc
     1741 ttttatgtag ttttgcttgt ttggaagttg attttgtttc atttcatttt ctgtagcttg
     1801 ggttttctaa ctgttaatag ttttaatttc tttgatcgtt catttcattg tacattcttt
     1861 ttcttacaca atcagtgatg ttgatcttag tgtggctgag ctgtgctcct ccctcctagt
     1921 gactagtatg tagtttttta cttaggattt ccttggcttt gtgctttgtt ttacttttga
     1981 gggtttctgt tgttgttttg gttggtttta gttttctgtt tttcttattt ttcactattt
     2041 tactttccat cttagctttc tttcttccct ttatttcttt ttccttcctc ttaggtagca
     2101 tttatactct gttacctcca atgagcttcg ggagcaaacg ggagtcagaa aggctccgat
     2161 ctcagggcag ctcttgcaca gagagtttct gctctcaata tttggttttg aataccatcg
     2221 gccatggttt ccacgcggcc gtgaagttgg ccgtgcaccg cctcacaggt acccccgtgg
     2281 ctgtcaaaat gatcctcaag agacaacagt ggtgccagca ggtcacatct gaggtagaaa
     2341 tcatgatgag gatcaaccac ccaaatattg tatctctcat acaagtcatt gacactgaaa
     2401 agataacata cctcatcatg gagttggcca aggggaacca gctttattct cacatcaaag
     2461 aggctggcca tctgcaggag gatgaagcac ggggcatatt cagacaatta ttaagtgctg
     2521 tgggatactg ccatgaagaa ggcattatac accgggacct taaacccgat aatctgttag
     2581 tcgataccaa gggaagaatt aaaatcattg attttggttc tgccactcaa gtgcggcctg
     2641 ggcaaaagtt gagaaagccc tatgggactt atgcattttc tgctcctgag ctgttactcg
     2701 ggaaatttta tgagggcccc aaggtcgacg tgtgggccct aggagtaatt ctttattata
     2761 tgacagttgg aaaggtccca tttgaggctg ccagcatacc gctactccga aggcaaattg
     2821 tgttagggac gtacgttgtc ccacctggcc tgtcagaaga gctacaagac ctgctgagtc
     2881 ttttattgaa agtgaactcc cagcagaggc ccacaattcc tgatcttttg actcatccct
     2941 ggcttaagat agactcagag gggttcccac aaccttgtaa ggaactcatc cccctcaggc
     3001 cagacccagc cattcttaga gcaatgcagg acattggatt tgaagcccaa gaggttaaag
     3061 actccctcga tcagaagaaa ttcaaccaaa gtatggcttg ttattaccta ttggaaaagc
     3121 aggctcttca ggagtgtgac aacccaaccc ggcctcatcc atgcatgacc ccattcccga
     3181 cccttgatta ccctgctact tcagtgcgag ggctcagaag tcgaggaagc gagcccagat
     3241 ggctcgggtc atcctccgat agtcaaggtt ctgacctcgg ccagactcct agtcatcgat
     3301 tagtcaagag ggccagttgg cctggcggtc ttctctgcag gccacgtcag atagcaccca
     3361 cagtggagct aacccacaga atttctatta gtgacccctg cttttcttca gtgcacagca
     3421 gaggcaagaa gaccatcaac actgaaagca cagaagacaa atccagtgac tcagcagagg
     3481 ttaagcctgt cgcaagcagg ccctggccca aaagatttag ggggtgggtc aagaacatcc
     3541 gaaatggcct gatgaacctg tgttgctgca ttccgtccag aaaaaaacct cccctggggc
     3601 acaacagagt tgttccccag aaatgaagaa catggaagga atccagagag caagcatcca
     3661 acactgccca gaagatcact agaggatgcc ggatgctgca tctctgcagt cccagtattg
     3721 aagtggaccc acgtgtggac acggtcctgc agaagggagc gctgtgagag ctgtcacctt
     3781 ccaggtcagc tgtggaagga tgaaagcaaa tgaagagatg ccaggtggca agagagcacc
     3841 tcaaaggcat cactcttcct ggtggaggtt gaaaaccagt ccaaagctga taaagaccag
     3901 agcccttttg ccgaccaggg tcacatcaca cacctcctct tggcacaagt tctcgcctca
     3961 ctcttagtgg agaatatatg tcttctcaat gtgtttatcc gactctgaga ataaaatagc
     4021 tgtttgtgaa agatga
//
