LOCUS       XM_039100971             820 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serum amyloid A-5 protein-like
            (LOC120099809), mRNA.
ACCESSION   XM_039100971
VERSION     XM_039100971.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100971.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..820
                     /gene="LOC120099809"
                     /note="serum amyloid A-5 protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins, and 64% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120099809"
                     /db_xref="RGD:41378349"
     CDS             455..820
                     /gene="LOC120099809"
                     /codon_start=1
                     /product="serum amyloid A-5 protein-like"
                     /protein_id="XP_038956899.1"
                     /db_xref="GeneID:120099809"
                     /db_xref="RGD:41378349"
                     /translation="MKLLTSLLLCSLTLGVSSSWLSFVKEAYQGAGDMWRAYSDMKEA
                     KWKNSDKYFRARGDYEAAQRGPGGAWAAEVISDAREGLQSFFGSGHEDTMADQEANRH
                     GRSSKDPNHYRPAGLPDKY"
ORIGIN      
        1 cacagtgact tcgtgcacac acacacacac acacacacac acacacacac acacacacac
       61 gcacgttttt gctctttctt ctttcccaga gtgtggtttc ctcttaaaga atgctgtctt
      121 ctacagatat ggtttgaagt ttgtgttgga ctgagggcac aggtgggaaa tgctacttag
      181 tgacctacaa gttcctatag tgggcggcaa tctggtctta gtgtttgtct tcctctatcc
      241 gagttgcctt cctgtcctcc cagcagactt ggttcacggc caagggtatc agaactgatt
      301 cttgtgtctt tgaggaacat cctgttgcaa ggacgtctgg gtgtcccact gggatctcta
      361 gtggacaacc agcctttccc tggataacag atgctccaga gggcggtgca aatctgtgca
      421 tgtctccttg agcctctctc ttcatctccg caggatgaag cttctcacca gcctcctttt
      481 gtgctccctg accctgggag tcagcagcag ttggctttca ttcgtcaagg aggcttacca
      541 aggggcaggg gacatgtggc gagcctactc cgacatgaag gaggccaagt ggaaaaactc
      601 agacaaatac ttccgtgctc ggggggacta cgaggctgcc caaaggggcc ctgggggagc
      661 ctgggcggct gaagtcatta gcgatgcaag agagggctta cagagtttct tcggcagtgg
      721 acatgaggac accatggctg accaggaagc caacagacat ggccgcagca gcaaggatcc
      781 taatcactac agacctgctg gcctgcctga caaatactga
//
