LOCUS       XM_039100869           10017 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus extracellular matrix protein
            FRAS1-like (LOC120099794), transcript variant X1, mRNA.
ACCESSION   XM_039100869
VERSION     XM_039100869.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10017
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..10017
                     /gene="LOC120099794"
                     /note="extracellular matrix protein FRAS1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 15 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:120099794"
                     /db_xref="RGD:41380789"
     CDS             5379..8330
                     /gene="LOC120099794"
                     /codon_start=1
                     /product="extracellular matrix protein FRAS1-like"
                     /protein_id="XP_038956797.1"
                     /db_xref="GeneID:120099794"
                     /db_xref="RGD:41380789"
                     /translation="MSLPGPDTHAQNHKSTLHRQLERAAAGTCSQCDHATAGTCSQCD
                     HAAAGTCSQCDPAAAGTCSQCGHAIAGTCSQCDHAAAGTCSQCGHAAAGTCSQCDHAA
                     AGTCSQCNHAAAGTCSQCGHAAAGTCSQCNHAAAGTCSQCDPAAAGTCSQCGHAAAGT
                     CSQCDHAAAGTCSQCGHAAAGTCSQCDHAIAGTCSQCDHAAAGTCSQCDPAAAGTCSQ
                     CDHAAAGTCSQCNHAAAGTCSQCDHAAAGTCSQCDHAAAGTCSQCDHAAAGTCSQCDH
                     AAAGTCSQCDPAAAGTCSQCDHAAAGTCSQCDPAAAGTCSQCDPAAAGTCSQCDPAAA
                     GTCSQCDPAAAGTCSQCDPAAAGTCSQCDHAIAGTCSQCDHAAAGTCSQCSQCDHAAA
                     GTCSQCDHAAAGTCSQCDHAAAGTCSQCNHAAAGTCSQCDHAAAGTCSQCDHAAAGTC
                     SQCDPAAAGTCSQCDPAAAGTCSQCDPAAAGTCSQCDHAAAGTCSQCDHAIAGTCSQC
                     DHAIAGTCSQCDHAAAGTCSQCDPAAAGTCSQCDHAAAGTCSQCDHAIAGTCSQCDHA
                     AAGTCSQCDHAAAGTCSQCDHAAAGTCSQCNHAAAGTCSQCDHAAAGTCSQCDHAAAG
                     TCSQCDPAAAGTCSQCDPAAAGTCSQCDPAAAGTCSQCDHAAAGTCSQCDHAIAGTCS
                     QCDHAAAGTCSQCDHAAAGTCSQCDPAAAGTCSQCDHAAAGTCSQCDPAAAGTCSQCD
                     PAAAGTCSQCDPAAAGTCSQCDHAIAGTCSQCDHAIAGTCSQCDPAAAGTCSQCDHAI
                     AGTCSQCDHAAAGTCSQCDHAAAGTCSQCNHAAAGTCSQCDHAAAGTCSQCDHAAAGT
                     CSQCDPAAAGTCSQCDPAAAGTCSLCDPAAAGTCSQCDHAAAGTCSQCDHAIAGTCSQ
                     CDHAAAGTCSQCDHAAAGTCSQCDPAAAGTCSQCDHAAAGTCSQCDPASAGTCSQCDP
                     APVVPPLKDRV"
ORIGIN      
        1 ctccaaactc tgagccgcca acactttgct gctctcacac agaggcttgg tgagcctgct
       61 agatggctca cgtttgactg cagtagtcag aatggggcag agggcagatc tgtcagtacc
      121 tgctgaccac tgtttgggta caggtaggta aacctatcag ccagcttctt gctgtatccc
      181 tgtgactcag ggtactccaa ccacatctct ggtctaacct aagaaggcca gattctccag
      241 cagtgagacc tttgcacatc tcagttccgt gttgctgctg aaagtgttac ttgtccatgt
      301 gtgtaatgcc agaggaggtc ttaattcaca ggcccattgg aactgcgggc cagggccagc
      361 actccatgct ggtatcggga aacccttgta gctgaatcct ggttcagagg gaccatttgc
      421 ctcttgcttg taagaagcaa gtatctgctt gccaacccag aaattctcct ggcaacatgt
      481 aacctctcat cagggaggtg ctggtgctgg tgggctcgct tcctggatgg ctctgactca
      541 gaccacactg ggtggaagag aaatgagtga ggctgtcatt tttcatatga ggggaaaaca
      601 atgcctactc ccagaaatca gtggtggttt gagtaggtat ggcctcgtta gagactcctg
      661 tgtgtgaatg cttggccata gggagtggca ctgttaggag gcctggcctt gttggaggaa
      721 atgtgacgct ggagaggtgg gctttgaagt cccatgcatg ttctcaagct ctgcacagtc
      781 tggaatagtc tccagatcaa gacatacaac tctaagcttc tccagcacca tggctgccta
      841 gatgctgcca tgcttcccat aatggtaaca gactgaacct gaaactctaa gccggcccca
      901 attaaatact ctccttatta ggatggtata tcttcacagc tacagaaatc ctaactaaca
      961 cagcacccca aacaccacag aagctatcca gaccctggtt ctattcctca tggcactccc
     1021 taggcccacc tgacacctgt tatcaaatag tcattacccc cctggtagag ggcacacgtg
     1081 ggctctcacc ctgaaagtaa gcattgccca aggtcttgac tgagatctga agcagagagc
     1141 ctggctccgg ggtcatgcac ttcccagcag gacacccaca ggaaggtgaa agactactaa
     1201 ataaaggatg tatatgttcc ttattcacct ggctgtctac caaggaacac tgtcttctgt
     1261 gaacagtgac tgctgttcta cctggatgaa actgcatgcg taatataatt tccgggcaga
     1321 tctgttcatc cacacccctc tgggatgtaa aaggcacact gtgttgcata aacagttatg
     1381 tcccagaaaa cttgctggtg ccagctccaa ctcaagtttc cattgactag ctaaggatgt
     1441 tctcagggaa gccaatgtgg tgtcacctgt cacacggtct ccatactttg cctgtctagg
     1501 ttgtgctgct gttgtatcac taaccccgcc tcccagggga ccagtgtcca caacatcttc
     1561 ccaagcacta tgctgatgca gttgcccttg gtactacatg gagcatggct agccagatcc
     1621 ctacagctcg gggcttcatg gagggtggta tggtacttgt cacttgtgac ctggtctcca
     1681 agaagcagga ctatggtaga aatgataact agctctgttg aagtaaacca tgcactatag
     1741 aaacgtggat gccagggagg gtgctgattg aagccagtgg gagagcaggt ggtaccctga
     1801 aaagggctca ctgctgtcaa agttagtttc tgctaacacc tcctgactgg tcagcgccac
     1861 ctcccactct tcatatggtc tatcctcagg aaagggaagt gctagtgtat ataatgatat
     1921 acactataat gatactggtc catcgaatta gcatcttgcc gtttgtctct caggaaggtg
     1981 tcagcatcca gcctggactc cattctcaac ggcctggggt tctctggggt tcctttggtg
     2041 tatcatatgc ttgggtcacc agccagctca acctaacagc taacctccaa gcccccgttt
     2101 tcctgaattt tatgggcttt aacttagggc agcagccaca gtaccagagt cctgcagctg
     2161 taacagccaa agttgtccta gctccactgg catcagatag tctggctgga gatgtgtaga
     2221 gtagtggggt ggctaacgtc aacctgactg gattgagaag ggctttaaaa agtgtgcttc
     2281 ttggtgtgtc tcgagggctt tccagagagg attaagtgag atagaagatc cactctacac
     2341 atgagaagtt tcattcccta gggtcagcga ctggacagaa taaaagagag cttactgtac
     2401 aacacaggca tccttgctgt gtttctgatg gttctaaacc tgggtgtggt tagattcatc
     2461 gtatccaata gctcccctca ggggccaact ctgcccatct tacatgctaa gctttttgtc
     2521 ctaagataaa atatgcagtg tgaacgatag gaggatggaa tgctttgcat ctgattcttg
     2581 tctctggtgt gtcctgttcc acgatgccct ccctgccatg atggcttagg agagatatgg
     2641 gctatgatga atctaaccac acccgggttc agagccatca tgaagaacct ggaaagtcaa
     2701 agcaagacct gagaagtctg cctactcttc tcccagccaa tcagaagtgg taaggagaca
     2761 tgtggccacc aatctcaaac ccataagaga tgcctgagcg cactagtggt gggaaagaaa
     2821 tagcaggaac ttctacacaa attctaaacc atggagccgg atacaacatt ctgatcagtt
     2881 caccaattcc tgatatcttt cagggtctcc aagttactat ctgtcaaatg ggaccacttg
     2941 actacatgaa ggcctcccag actagacttc taggattccc acaccagggt aagaaggctg
     3001 agctccaggt ggggaagagt gtggaagaga tgaaattggg aagaagaaaa ggatgaaaaa
     3061 acagaagttt aaagagggcc acgactttgg actgtggacc aggcacaggg ggatggacta
     3121 ggatagtgca ggttggttgg gatgctgagt gggatgggat gagatgtaga acactacatt
     3181 gtttctgcct ccaggacacc actcagaagc ccaatcaagc gatgtgtcct ctcaaagcct
     3241 aaggctatct ccatatttat ctcattcatc tcccttgaga tgaatatgag taaccatgga
     3301 taaccattcc ccacccagga actcctcttt atccccactc tcctaacctt caccatcttc
     3361 ctggccactc cctaaatccc ttcaatggat ctttatagcc cagacatata tatacatata
     3421 tatatacaca catacatata catatatgtg tgtgtgtgta tacgtatgta tatatacaca
     3481 tatatacata cacatataca tatatgtatg tatgtatgtg tatatatatg ttgggttgcc
     3541 ttcaacccca tctttggact tctctcccaa cgttcctcca tgtgtggtca cagccagaac
     3601 tttaggtcac atctaagact taacagaatc acgtattgtc aatcacgtat tatcttcctc
     3661 ctcccaactg gattaaaagc tcagtaagaa caaaggctat gctttgatcc ttctggatcc
     3721 tcggttttct ccagcaaacc tgaccctggc agaggctcgc tgaatgttgg tgtgaaaaca
     3781 ttgccctttg acctcaccac gtaagtgcac ccatacccac ctcaggaagt tgtctcattg
     3841 tctctgtaac tcagatacaa ggcccaatta taccttactt cctctctttt gttcacaccc
     3901 cccacccaac ctttcttgaa ggcctactga atgtcaactt gcataggaac tcaagtgtcc
     3961 actgctccca gctcgtatcc tcagagtccc atctcttgcc ctcatcctcc cacacagcag
     4021 ctgcccagtc atgcctcagc tctcccatag cttccttgac tccatacttg gccacataga
     4081 gacaagatga ccgttgtaat gtgactcaga ctactgtcct tataaccact taaaacccac
     4141 aaataacttc cccataacga ttttttttta ttttttttgt ttgtttaaag atttatttat
     4201 ttattttatt aagcacactg tagctgtctt cagacacacc agaagaggga gtcagatctc
     4261 attacagatg gttgtgagcc accatgtggt tgctgggatt tgaactcagg acctctgaaa
     4321 gagcagtcag tgctcttaac ctctgagcca tctctccagc cccccataac gattttttaa
     4381 gtcatgcttt tcagcagaat tcccatgacc ctccctgatg gctccaagct tccccctccc
     4441 agtgcctgtt ctgttaactc tagaccctca aatgtgcctc tgctctgctc tcagtgtgtg
     4501 cacgtgagtt attcctttgt ggaacatttt ttttccatag tccctcaacc ctatgtcaac
     4561 ctcatcttct gcatttgtct ctgttctacc agaaatttcc ctcatggccc atccccacct
     4621 tcctagctca gcagcccctc ccccaccaac ctctgtcagt ctttgtgtct tctaagccag
     4681 gactttgcct agtgtatttg ccattagaac catcaaatat cttcatatgg tatagaaaac
     4741 accctttgca tagaatatat ttagcagtca cacaccttta atctcagcac tcagggagcc
     4801 tctgaggcag aaggatcatg agttccaagc cagcctgagg tatacataaa aactttatgt
     4861 caaaaacaca agaaagagat ctccgggtgt tgtcccgtag tagagaacct tgcataacat
     4921 gcttaaagcc ttaggagcaa ttctcagatc aggaaaacaa tgttcataag tatttgactt
     4981 agccagtcaa aggggctcat accagtaatc caattacttg ggaggctgag ggagaaagat
     5041 tgccatgagt tcaaagtcaa cagtgagtac cagaccagcc aggggtacat agtataatac
     5101 cctatcacaa acacacacac atacacacac acacacacac acacacacac acacacacac
     5161 acacacacag gggtcaggga gtcagtgttg tttgttgcct ggtttaaaaa aaaaaaagcc
     5221 aggtgtgact ataatgatgg atgggcattg gttcacacag atgccatgat gagagcagtg
     5281 accttgtgat ttgtccttag ctgatctata tgctacgtac cctcccatgc tagcaggctc
     5341 tgtatccaga aagagttccc aagtaccaaa gctgccctat gtcattgcct ggtcctgaca
     5401 cgcatgcaca gaaccacaag tctacactcc accgacagct ggaacgtgca gcagctggaa
     5461 catgtagcca gtgtgaccat gcaacagctg gaacgtgtag ccagtgtgac catgcagcag
     5521 ctggaacgtg tagccagtgt gaccctgcag cagctggaac gtgtagccag tgtggccatg
     5581 caatagctgg aacatgtagc cagtgtgacc atgcagcagc tggaacgtgt agccagtgtg
     5641 gccatgcagc agctggaaca tgtagtcagt gtgaccatgc agcagctgga acgtgtagtc
     5701 agtgtaacca tgcagcagct ggaacgtgta gccagtgtgg ccatgcagca gctggaacat
     5761 gtagtcagtg taaccatgca gcagctggaa cgtgtagcca gtgtgaccct gcagcagctg
     5821 gaacatgtag ccagtgtggc catgcagcag ctggaacatg tagccagtgt gaccatgcag
     5881 cagctggaac gtgtagccag tgtggccatg cagcagctgg aacgtgtagc cagtgtgacc
     5941 atgcaatagc tggaacatgt agccagtgtg accatgcagc agctggaacg tgtagccagt
     6001 gtgaccctgc agcagctgga acgtgtagcc agtgtgacca tgcagcagct ggaacgtgta
     6061 gccagtgtaa ccatgcagca gctggaacat gtagccagtg tgaccatgca gcagctggaa
     6121 catgtagtca gtgtgaccat gcagcagctg gaacatgtag tcagtgtgac catgcagcag
     6181 ctggaacatg cagccagtgt gaccatgcag cagctggaac gtgtagtcag tgtgaccctg
     6241 cagcagctgg aacgtgtagc cagtgtgacc atgcagcagc tggaacgtgt agccagtgtg
     6301 accctgcagc agctggaacg tgtagccagt gtgaccctgc agcagctgga acgtgtagcc
     6361 agtgtgaccc tgcagcagct ggaacgtgta gccagtgtga ccctgcagca gctggaacgt
     6421 gtagccagtg tgaccctgca gcagctggaa cgtgtagcca gtgtgaccat gcaatagctg
     6481 gaacatgtag ccagtgtgac catgcagcag ctggaacatg tagtcagtgt agtcagtgtg
     6541 accatgcagc agctggaacg tgtagccagt gtgaccatgc agcagctgga acgtgtagtc
     6601 agtgtgacca tgcagcagct ggaacatgta gtcagtgtaa ccatgcagca gctggaacat
     6661 gtagccagtg tgaccatgca gcagctggaa catgtagtca gtgtgaccat gcagcagctg
     6721 gaacgtgtag ccagtgtgac cctgcagcag ctggaacgtg tagccagtgt gaccctgcag
     6781 cagctggaac gtgtagccag tgtgaccctg cagcagctgg aacgtgtagc cagtgtgacc
     6841 atgcagcagc tggaacgtgt agccagtgtg accatgcaat agctggaacg tgtagccagt
     6901 gtgaccatgc aatagctgga acatgtagcc agtgtgacca tgcagcagct ggaacgtgta
     6961 gccagtgtga ccctgcagca gctggaacgt gtagccagtg tgaccatgca gcagctggaa
     7021 catgtagtca gtgtgaccat gcaatagctg gaacatgtag ccagtgtgac catgcagcag
     7081 ctggaacgtg tagccagtgt gaccatgcag cagctggaac gtgtagtcag tgtgaccatg
     7141 cagcagctgg aacatgtagt cagtgtaacc atgcagcagc tggaacatgt agccagtgtg
     7201 accatgcagc agctggaaca tgtagtcagt gtgaccatgc agcagctgga acgtgtagcc
     7261 agtgtgaccc tgcagcagct ggaacgtgta gccagtgtga ccctgcagca gctggaacgt
     7321 gtagccagtg tgaccctgca gcagctggaa cgtgtagcca gtgtgaccat gcagcagctg
     7381 gaacgtgtag ccagtgtgac catgcaatag ctggaacatg tagtcagtgt gaccatgcag
     7441 cagctggaac atgtagtcag tgtgaccatg cagcagctgg aacgtgtagc cagtgtgacc
     7501 ctgcagcagc tggaacgtgt agccagtgtg accatgcagc agctggaacg tgtagtcagt
     7561 gtgaccctgc agcagctgga acgtgtagcc agtgtgaccc tgcagcagct ggaacgtgta
     7621 gccagtgtga ccctgcagca gctggaacgt gtagccagtg tgaccatgca atagctggaa
     7681 cgtgtagcca gtgtgaccat gcaatagctg gaacatgtag ccagtgtgac cctgcagcag
     7741 ctggaacgtg tagccagtgt gaccatgcaa tagctggaac gtgtagccag tgtgaccatg
     7801 cagcagctgg aacatgtagt cagtgtgacc atgcagcagc tggaacatgt agtcagtgta
     7861 accatgcagc agctggaaca tgtagccagt gtgaccatgc agcagctgga acatgtagtc
     7921 agtgtgacca tgcagcagct ggaacgtgta gccagtgtga ccctgcagca gctggaacgt
     7981 gtagccagtg tgaccctgca gcagctggaa cgtgtagcct gtgtgaccct gcagcagctg
     8041 gaacgtgtag ccagtgtgac catgcagcag ctggaacgtg tagccagtgt gaccatgcaa
     8101 tagctggaac atgtagccag tgtgaccatg cagcagctgg aacatgtagt cagtgtgacc
     8161 atgcagcagc tggaacgtgt agccagtgtg accctgcagc agctggaacg tgtagccagt
     8221 gtgaccatgc agcagctgga acgtgtagtc agtgtgaccc tgcatcagct ggaacgtgta
     8281 gtcagtgtga ccctgcccct gtagttccac cattaaagga cagagtgtga gcctcagtgc
     8341 tgtgaccttt gagagtctgc aaatcagaag tcaagcccca actcacactc gagccccagt
     8401 tcaacaacag aagctgagta gtaggagtgg tgtctacttt ggaagcattt actccacata
     8461 cattgaactg taccttcagc caaaagtgag ggagagagaa atgatgtcac atattatgct
     8521 tccagcagcc ctctgtccac agagagcttg ccttgcaggg atcatgaggt ggagagcctt
     8581 ggctgccgca cgtctcctcc accagtgtgt ggttataact gttttccatg atgacgcagg
     8641 ccacacttac acatgctaca gtgtgtgcat gtctacctga cgctgtttat ggtggcagca
     8701 tgaaattgcc acggcaggaa tttcaacact gaaattcaca caggaacaag tggggcctat
     8761 tcaggatgcc actgcctgcc tcagcagagg tgataacaag ggcgagcaaa aaacaggaga
     8821 tgctgaggat ccagggtcag cctctgccct gcccttcctg cttggcccca agagcctgcc
     8881 tagaagacac aaggcagccc cacagttcca cagtccagag ctctgcaaac acaggcactg
     8941 actggaaatg gagagactta taaccttaat atctatgcgt ccggtgtggg gtgtgtgtgt
     9001 gtgtgtgtgt ctgatacttt cttacagttt taatctgaat tattctccac aagcatgttt
     9061 cccattgttt tgaaggctgt ggagtcatta ggatgctggg gcctgtcggg tggaagcggg
     9121 tcacaaagga ccgtctgtgg aggttctaac tggttctaac ctgcttccga tgcctcctgt
     9181 ctgtctccat ctgaacaaag aacaagctat ccatgctgta agagacagag ccctctgtat
     9241 gactgagaca aacaaattct tccctgctca agttgttttt gtcaagtatt ttgtaactac
     9301 aaggaaaaat gtatgcatac gaatcaaaaa tgttaaccgg gccagggagt tcaggcttgg
     9361 aggaagctta ggcaggaggg tcacaagaga aaggccagcc tatcatacca agagagctca
     9421 aagccagcct ggacaacaca gatgctgttc tgtagaaata aagggtaaaa aggaagctgg
     9481 gttttgttgc tacaatccct tcccttggaa agatgtaaat tatgtatatg tcctccccta
     9541 tggagccaac aacagaccaa cttgtgagtc cacacttcac tatggggacc agtgagggct
     9601 taaacttgct taccaagcag gagtgggatt accagcagga gcatgggtgt cttcaaagca
     9661 gccatactgg aagatttgca tctaacactc tccacagctg tgtacatgga gtccccttgt
     9721 cttactttgg tttctagcgt atgatagatc gttgtgaccc taagcaacct gggaaggaaa
     9781 aggtttaatt tcccctttgt gatggatagc cttatgtcaa cttgacacga gatagagtta
     9841 tggtaaagga gaaaacctaa acttaaaaaa aaaaaaaaaa aaaacaactc cataaagtcc
     9901 agttataagc catttttaat tatgttatta aaacataaca aattatgtaa aaattatgtt
     9961 aattagttgt tgcggagaga ggacccagcc ccttatgggt ggtgttatcc ctgggct
//
